RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 LPAR6P43657 344 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 HABP2Q14520 560 aaPredicted RBP10.24□□□□□ -0.77
VPS52-220ENST00000493674 POU2AF1Q16633 256 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 TMEM249Q2WGJ8 235 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 MINOS1Q5TGZ0 78 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 DHRS7BQ6IAN0 325 aaPredicted RBP10.24□□□□□ -0.77
VPS52-220ENST00000493674 GSG1LQ6UXU4 331 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 ZNF695Q8IW36 515 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 WFDC11Q8NEX6 87 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 SEC22AQ96IW7 307 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 NMES1Q9C002 83 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 COMMD9Q9P000 198 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 PRELID3BQ9Y3B1 194 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 TBL2Q9Y4P3 447 aaKnown RBP10.24□□□□□ -0.77
VPS52-220ENST00000493674 MINOS1-NBL1R4GNA1 71 aa10.24□□□□□ -0.77
VPS52-220ENST00000493674 A0A0G2JRQ6 117 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 OOSP1A8MZH6 123 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 FCGR3BO75015 233 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 HPRT1P00492 218 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 ARG1P05089 322 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 SLC25A6P12236 298 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 HTR1DP28221 377 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 OR2B11Q5JQS5 317 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 TPTE2P1Q5T6R2 138 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 TGIF2LXQ8IUE1 241 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 OR4S2Q8NH73 311 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 C2orf50Q96LR7 162 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 DPM3Q9P2X0 92 aa10.23□□□□□ -0.77
VPS52-220ENST00000493674 IGHV1-3A0A0C4DH29 117 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 CENPVL3A0A0U1RRI6 287 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 LEUTXA8MZ59 168 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 BOLA2-SMG1P6H3BVE0 249 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 J3QLI3 93 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 PITX3O75364 302 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 IFNA21P01568 189 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 C1QBP02746 253 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 GAPDHP04406 335 aaKnown RBP10.22□□□□□ -0.77
VPS52-220ENST00000493674 RRASP10301 218 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 FOSL1P15407 271 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 REG1BP48304 166 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 GZMKP49863 264 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 MIDNQ504T8 468 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 TMEM177Q53S58 311 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 PDPNQ86YL7 162 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 FAM219AQ8IW50 185 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 OR8H3Q8N146 312 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 ZBTB8BQ8NAP8 495 aaPredicted RBP10.22□□□□□ -0.77
VPS52-220ENST00000493674 CFHR4Q92496 578 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 LHX4Q969G2 390 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 SLC35D1Q9NTN3 355 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 MMP24Q9Y5R2 645 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 TLN2Q9Y4G6 2542 aa10.22□□□□□ -0.77
VPS52-220ENST00000493674 NAV3Q8IVL0 2385 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 C5orf51A6NDU8 294 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 FAM90A9PA6NNJ1 464 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 ATG12O94817 140 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 APOA2P02652 100 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 IL6RP08887 468 aaPredicted RBP10.21□□□□□ -0.77
VPS52-220ENST00000493674 CEACAM3P40198 252 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 CYCSP99999 105 aaKnown RBP10.21□□□□□ -0.77
VPS52-220ENST00000493674 RTL8BQ17RB0 113 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 IAH1Q2TAA2 248 aaPredicted RBP10.21□□□□□ -0.77
VPS52-220ENST00000493674 AARDQ4LEZ3 155 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 Q5BKY6 102 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 LHFPL4Q7Z7J7 247 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 MAPK1IP1LQ8NDC0 245 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 OR4D5Q8NGN0 318 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 OR2T35Q8NGX2 323 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 RPEQ96AT9 228 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 GPR146Q96CH1 333 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 R3HDM4Q96D70 268 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 SPIN2AQ99865 258 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 SPIN2BQ9BPZ2 258 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 TMUB1Q9BVT8 246 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 CHIAQ9BZP6 476 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 COA4Q9NYJ1 87 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 WASHC3Q9Y3C0 194 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 AUP1Q9Y679 476 aa10.21□□□□□ -0.77
VPS52-220ENST00000493674 NSD1Q96L73 2696 aaPredicted RBP10.21□□□□□ -0.78
VPS52-220ENST00000493674 TRAV14DV4A0A0A6YYC5 116 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 IGHV1-69DA0A0B4J2H0 117 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 A0A1B0GU03 582 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 C13orf42A0A1B0GVH6 325 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 MARCH11A6NNE9 402 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 FAM25EA8MYX2 175 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 SMLR1H3BR10 107 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 CRYZL1O95825 349 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 FSHBP01225 129 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 IGHV1-69P01742 117 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 IGKV1-16P04430 117 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 MC5RP33032 325 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 MTORP42345 2549 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 RAB13P51153 203 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 ARHGDIBP52566 201 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 Q6ZRM9 215 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 DYNAPQ8N1N2 210 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
VPS52-220ENST00000493674 OSR1Q8TAX0 266 aaPredicted RBP10.2□□□□□ -0.78
VPS52-220ENST00000493674 PPP1R1CQ8WVI7 109 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms