RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SSBP1Q04837 148 aaKnown RBP5.34□□□□□ -1.55
VPS52-219ENST00000493379 PLA1AQ53H76 456 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 TGIF2LXQ8IUE1 241 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 DRAM1Q8N682 238 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 GVQW1Q8N7I0 195 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 BEST4Q8NFU0 473 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 NPBQ8NG41 125 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 OR10V1Q8NGI7 309 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 OR4F5Q8NH21 305 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 IL1F10Q8WWZ1 152 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 DDB2Q92466 427 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 S1PR3Q99500 378 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 NEU1Q99519 415 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 BEX1Q9HBH7 125 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 HEYLQ9NQ87 328 aaPredicted RBP5.34□□□□□ -1.55
VPS52-219ENST00000493379 ABCB10Q9NRK6 738 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 MTFP1Q9UDX5 166 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 RBMX2Q9Y388 322 aaKnown RBP5.34□□□□□ -1.55
VPS52-219ENST00000493379 OR2W1Q9Y3N9 320 aa5.34□□□□□ -1.55
VPS52-219ENST00000493379 ABCA13Q86UQ4 5058 aa5.34□□□□□ -1.56
VPS52-219ENST00000493379 DPPA5A6NC42 116 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 OR5H14A6NHG9 310 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 HSPA12AO43301 675 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 GSTZ1O43708 216 aaPredicted RBP5.33□□□□□ -1.56
VPS52-219ENST00000493379 RBBP9O75884 186 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 NDUFA3O95167 84 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 MOSP00540 346 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 CD74P04233 296 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 CRYBA1P05813 215 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 SNRNP70P08621 437 aaKnown RBP5.33□□□□□ -1.56
VPS52-219ENST00000493379 OR5H8P0DN80 308 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 PTBP1P26599 531 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS52-219ENST00000493379 TNFSF8P32971 234 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 OR3A3P47888 321 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 RAG2P55895 527 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 BLCAPP62952 87 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 MRPS10P82664 201 aaKnown RBP5.33□□□□□ -1.56
VPS52-219ENST00000493379 DYRK1AQ13627 763 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 CDK10Q15131 360 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 DHRS7BQ6IAN0 325 aaPredicted RBP5.33□□□□□ -1.56
VPS52-219ENST00000493379 LINC00299Q6ZSB3 139 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 LYG1Q8N1E2 194 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 FAM71E2Q8N5Q1 922 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 C5orf56Q8N8D9 126 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 Q8N9W7 124 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 OR2T10Q8NGZ9 312 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 OR56B4Q8NH76 319 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 SETD6Q8TBK2 473 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 MAFIPQ8WZ33 124 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 TRIM63Q969Q1 353 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 C5orf30Q96GV9 206 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 AKR1E2Q96JD6 320 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 NPFFR1Q9GZQ6 430 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 ZNF702PQ9H963 129 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 SERTAD4Q9NUC0 356 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 SDHAF2Q9NX18 166 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 PLXNB1O43157 2135 aa5.33□□□□□ -1.56
VPS52-219ENST00000493379 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 IGKV1D-13A0A0B4J2D9 117 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ZNF736B4DX44 427 aaPredicted RBP5.32□□□□□ -1.56
VPS52-219ENST00000493379 H0YJW9 148 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 GABARAPH6UMI1 98 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 BET1O15155 118 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 IGKV1D-33P01593 117 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 IGKV1-33P01594 117 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 IGHG2P01859 326 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 OR8U9P0C7N5 309 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 IGKV1-13P0DP09 117 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 TBPP20226 339 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 MDKP21741 143 aaPredicted RBP5.32□□□□□ -1.56
VPS52-219ENST00000493379 DUTP33316 252 aaKnown RBP5.32□□□□□ -1.56
VPS52-219ENST00000493379 CRIP2P52943 208 aaPredicted RBP5.32□□□□□ -1.56
VPS52-219ENST00000493379 F2RL1P55085 397 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 BRWD1-AS2P59051 145 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ACTBP60709 375 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ZNF124Q15973 351 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 LY6EQ16553 131 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 RPL39P5Q59GN2 51 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 PYHIN1Q6K0P9 492 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 MOB3BQ86TA1 216 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 CCDC190Q86UF4 302 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 LAX1Q8IWV1 398 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 CADM3Q8N126 398 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ZNF645Q8N7E2 425 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ZNF383Q8NA42 475 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 OR8U1Q8NH10 309 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 CAPSLQ8WWF8 208 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ABHD14BQ96IU4 210 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ADTRPQ96IZ2 230 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 CITED1Q99966 193 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 SLC25A33Q9BSK2 321 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 MRPL20Q9BYC9 149 aaKnown RBP5.32□□□□□ -1.56
VPS52-219ENST00000493379 PRSS22Q9GZN4 317 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 LIN7CQ9NUP9 197 aaKnown RBP5.32□□□□□ -1.56
VPS52-219ENST00000493379 NECAP2Q9NVZ3 263 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 EXTL2Q9UBQ6 330 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 ZNF221Q9UK13 617 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 MOB4Q9Y3A3 225 aa5.32□□□□□ -1.56
VPS52-219ENST00000493379 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms