RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 NPIPB11E5RHQ5 1161 aa13.96□□□□□ -0.17
BRAT1-206ENST00000493232 CKS2P33552 79 aa13.96□□□□□ -0.17
BRAT1-206ENST00000493232 GALNT14Q96FL9 552 aa13.96□□□□□ -0.17
BRAT1-206ENST00000493232 EAF1Q96JC9 268 aaPredicted RBP13.96□□□□□ -0.17
BRAT1-206ENST00000493232 MUC15Q8N387 334 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 TMEM74BQ9NUR3 256 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 COL11A2P13942 1736 aaPredicted RBP13.96□□□□□ -0.18
BRAT1-206ENST00000493232 TMEM238LA0A1B0GVL6 79 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 A6NJY4 79 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 C17orf51A8MQB3 221 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF324O75467 553 aaPredicted RBP13.96□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF146Q15072 292 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 VN1R17PQ8TDU5 208 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 EEF1AKMT3Q96AZ1 226 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 OR4C12Q96R67 309 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 TLNRD1Q9H1K6 362 aa13.96□□□□□ -0.18
BRAT1-206ENST00000493232 ATG2BQ96BY7 2078 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 SSTR5P35346 364 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 TIMM23BQ5SRD1 257 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 OR5P3Q8WZ94 311 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 MRPL32Q9BYC8 188 aaKnown RBP13.95□□□□□ -0.18
BRAT1-206ENST00000493232 FOXJ2Q9P0K8 574 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 TCF19Q9Y242 345 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 OR4C46A6NHA9 309 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 PKIAP61925 76 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 OR51G1Q8NGK1 321 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF502Q8TBZ5 544 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 SMIM12Q96EX1 92 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 SMIM8Q96KF7 97 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 RECKO95980 971 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 PLAUP00749 431 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 ATP1A1-AS1Q5TC04 95 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 WFDC6Q9BQY6 131 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 CD74P04233 296 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 LINC01590Q5TEZ4 76 aa13.95□□□□□ -0.18
BRAT1-206ENST00000493232 TMEM14DPA8MWL7 114 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 PIN1P1O15428 100 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 GCGP01275 180 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 CCL19Q99731 98 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 BTF3P20290 206 aaKnown RBP13.94□□□□□ -0.18
BRAT1-206ENST00000493232 APOBEC3AP31941 199 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-206ENST00000493232 GLRXP35754 106 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 PHLDA3Q9Y5J5 127 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 ZNHIT1O43257 154 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 GLIPR1P48060 266 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 OR51M1Q9H341 326 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 ARID1AO14497 2285 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 ANOS1P23352 680 aa13.94□□□□□ -0.18
BRAT1-206ENST00000493232 CX3CL1P78423 397 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 WDR25Q64LD2 544 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF703Q9H7S9 590 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-206ENST00000493232 CTSBP07858 339 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 RAB37Q96AX2 223 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 PAM16Q9Y3D7 125 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 TRIP12Q14669 1992 aaPredicted RBP13.93□□□□□ -0.18
BRAT1-206ENST00000493232 ZG16O60844 167 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 NMUP48645 174 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 IFITM3Q01628 133 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 PNKDQ8N490 385 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 FADS6Q8N9I5 356 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF383Q8NA42 475 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 SPSB4Q96A44 273 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 MAP1LC3AQ9H492 121 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 KCNAB3O43448 404 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 RPLP1P05386 114 aaKnown RBP13.93□□□□□ -0.18
BRAT1-206ENST00000493232 NPPCP23582 126 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 ELOVL1Q9BW60 279 aa13.93□□□□□ -0.18
BRAT1-206ENST00000493232 C1orf162Q8NEQ5 155 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-206ENST00000493232 OR4B1Q8NGF8 309 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 C5orf66Q9H5L9 145 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 NMBP08949 121 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 COX6CP09669 75 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 FXYD3Q14802 87 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF660Q6AZW8 331 aaPredicted RBP13.92□□□□□ -0.18
BRAT1-206ENST00000493232 FDCSPQ8NFU4 85 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 TP53RKQ96S44 253 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 SNRPCP09234 159 aaKnown RBP13.92□□□□□ -0.18
BRAT1-206ENST00000493232 HERPUD1Q15011 391 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 TMEM177Q53S58 311 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 DNAJC13O75165 2243 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 AMY1AP04745 511 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 NRN1LQ496H8 165 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 NINQ8N4C6 2090 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
BRAT1-206ENST00000493232 TIAF1O95411 115 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 TNFSF10P50591 281 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 MIA3Q5JRA6 1907 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 LNP1A1A4G5 178 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 TRGC1P0CF51 173 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 TMEM187Q14656 261 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 LY6EQ16553 131 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 H3BVH4 76 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 CA2P00918 260 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 EGR4Q05215 589 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 CHCHD2Q9Y6H1 151 aaPredicted RBP13.91□□□□□ -0.18
BRAT1-206ENST00000493232 TPRP12270 2363 aaKnown RBP13.91□□□□□ -0.18
BRAT1-206ENST00000493232 TNS1Q9HBL0 1735 aaKnown RBP13.91□□□□□ -0.18
BRAT1-206ENST00000493232 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 DRAM1Q8N682 238 aa13.91□□□□□ -0.18
BRAT1-206ENST00000493232 MEGF10Q96KG7 1140 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms