RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 POC5Q8NA72 575 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 OR5B12Q96R08 314 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 OR4C12Q96R67 309 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 PARP12Q9H0J9 701 aaKnown RBP10.58□□□□□ -0.72
IRF1-210ENST00000493208 RANGRFQ9HD47 186 aaPredicted RBP10.58□□□□□ -0.72
IRF1-210ENST00000493208 RHBDL2Q9NX52 303 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 ZNF230Q9UIE0 474 aaPredicted RBP10.58□□□□□ -0.72
IRF1-210ENST00000493208 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
IRF1-210ENST00000493208 OR2W1Q9Y3N9 320 aa10.58□□□□□ -0.72
IRF1-210ENST00000493208 SAP30O75446 220 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 KIR2DS2P43631 304 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 KRTAP10-11P60412 298 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 UBE2KP61086 200 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 KCTD9Q7L273 389 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 SLC25A42Q86VD7 318 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 H1FOOQ8IZA3 346 aaPredicted RBP10.57□□□□□ -0.72
IRF1-210ENST00000493208 BVESQ8NE79 360 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 USMG5Q96IX5 58 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 HSD17B10Q99714 261 aaKnown RBP10.57□□□□□ -0.72
IRF1-210ENST00000493208 SPIN2AQ99865 258 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 SPIN2BQ9BPZ2 258 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 KLK15Q9H2R5 256 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 GNB4Q9HAV0 340 aa10.57□□□□□ -0.72
IRF1-210ENST00000493208 WI2-2373I1.2A0A1W2PRP0 233 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 CRYZL1O95825 349 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 SDC2P34741 201 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 MXD1Q05195 221 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 NEDD8Q15843 81 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 IDNKQ5T6J7 187 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 MMD2Q8IY49 270 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 OR4S2Q8NH73 311 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 LGALS14Q8TCE9 139 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 MAFIPQ8WZ33 124 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 S100A16Q96FQ6 103 aaKnown RBP10.56□□□□□ -0.72
IRF1-210ENST00000493208 FAM103A1Q9BTL3 118 aaKnown RBP10.56□□□□□ -0.72
IRF1-210ENST00000493208 COA4Q9NYJ1 87 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 ANXA10Q9UJ72 324 aa10.56□□□□□ -0.72
IRF1-210ENST00000493208 A0A087WXM4 84 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 A0A0B4J203 849 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 SHISA3A0PJX4 238 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 TMEM235A6NFC5 223 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 FCN1O00602 326 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 TNFAIP8O95379 198 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 BRI3O95415 125 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 DHFRP00374 187 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 DUTP33316 252 aaKnown RBP10.55□□□□□ -0.72
IRF1-210ENST00000493208 NDPQ00604 133 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 CATR1Q13166 79 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 MSMO1Q15800 293 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 C19orf54Q5BKX5 351 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 ZBTB34Q8NCN2 500 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 ACOT12Q8WYK0 555 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 MS4A10Q96PG2 267 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 OR51E2Q9H255 320 aa10.55□□□□□ -0.72
IRF1-210ENST00000493208 SMIM30A4D0T7 59 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 DPPA5A6NC42 116 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 FCGR3BO75015 233 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 TUSC2O75896 110 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 HRASP01112 189 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 SNRPBP14678 240 aaKnown RBP10.54□□□□□ -0.72
IRF1-210ENST00000493208 PLA2G7Q13093 441 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 CDK10Q15131 360 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 TNXAQ16473 311 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 ZNF66Q6ZN08 573 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 ANKRD13BQ86YJ7 626 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 BEST4Q8NFU0 473 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 DCUN1D4Q92564 292 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 CYYR1Q96J86 154 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 RHOVQ96L33 236 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 IFT46Q9NQC8 304 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 RBMX2Q9Y388 322 aaKnown RBP10.54□□□□□ -0.72
IRF1-210ENST00000493208 SMAD5-AS1Q9Y6J3 95 aa10.54□□□□□ -0.72
IRF1-210ENST00000493208 PRKDCP78527 4128 aaKnown RBP10.53□□□□□ -0.72
IRF1-210ENST00000493208 TRAV18A0A075B6X5 111 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 FAM223BA6NKX1 122 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 CYB5BO43169 146 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 PROP1O75360 226 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 IGHV3-11P01762 117 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 OR9G9P0C7N8 305 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 S100GP29377 79 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 MAS1LP35410 378 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 KIAA0141Q14154 515 aaPredicted RBP10.53□□□□□ -0.72
IRF1-210ENST00000493208 FAM223AQ8IWN6 122 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 OR5T1Q8NG75 326 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 CD300LFQ8TDQ1 290 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 NUDCD2Q8WVJ2 157 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 TCTEX1D2Q8WW35 142 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 SPATA2Q9UM82 520 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 FBXO7Q9Y3I1 522 aa10.53□□□□□ -0.72
IRF1-210ENST00000493208 SMIM31A0A1B0GVY4 71 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 AIREO43918 545 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 SOX15O60248 233 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 IGLV2-23P01705 113 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 EGR2P11161 476 aaPredicted RBP10.52□□□□□ -0.73
IRF1-210ENST00000493208 NFYAP23511 347 aaPredicted RBP10.52□□□□□ -0.73
IRF1-210ENST00000493208 PRSS8Q16651 343 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 OVCH2Q7RTZ1 564 aa10.52□□□□□ -0.73
IRF1-210ENST00000493208 NR2C2APQ86WQ0 139 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms