RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 RAB9AP51151 201 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 ARPC4P59998 168 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 RTL8BQ17RB0 113 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 UNQ5815/PRO19632Q6UWF5 114 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 LFNGQ8NES3 379 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 ARPC1AQ92747 370 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 SLC25A46Q96AG3 418 aa19.2■□□□□ 0.66
UPF3A-209ENST00000492270 FOXA2Q9Y261 457 aaPredicted RBP19.2■□□□□ 0.66
UPF3A-209ENST00000492270 TNCP24821 2201 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 XRCC3O43542 346 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 TUSC2O75896 110 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 LGALS7P47929 136 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 KRTAP10-11P60412 298 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 GNB1P62873 340 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 TAGLNQ01995 201 aaKnown RBP19.19■□□□□ 0.66
UPF3A-209ENST00000492270 CBX3Q13185 183 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 GRPEL2Q8TAA5 225 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 SNAPC3Q92966 411 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 ADTRPQ96IZ2 230 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 UBE2E2Q96LR5 201 aa19.19■□□□□ 0.66
UPF3A-209ENST00000492270 NAA50Q9GZZ1 169 aaKnown RBP19.19■□□□□ 0.66
UPF3A-209ENST00000492270 RBMX2Q9Y388 322 aaKnown RBP19.19■□□□□ 0.66
UPF3A-209ENST00000492270 CRYZL1O95825 349 aa19.18■□□□□ 0.66
UPF3A-209ENST00000492270 RRASP10301 218 aa19.18■□□□□ 0.66
UPF3A-209ENST00000492270 RPL30P62888 115 aaKnown RBP19.18■□□□□ 0.66
UPF3A-209ENST00000492270 FXYD3Q14802 87 aa19.18■□□□□ 0.66
UPF3A-209ENST00000492270 REC114Q7Z4M0 266 aa19.18■□□□□ 0.66
UPF3A-209ENST00000492270 S100A16Q96FQ6 103 aaKnown RBP19.18■□□□□ 0.66
UPF3A-209ENST00000492270 VSIG4Q9Y279 399 aa19.18■□□□□ 0.66
UPF3A-209ENST00000492270 I3L521 148 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 TMEM267Q0VDI3 215 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-209ENST00000492270 FHL3Q13643 280 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 MRGPRG-AS1Q2M3A8 158 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 ACTBL2Q562R1 376 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 OR2B11Q5JQS5 317 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 KCTD9Q7L273 389 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 TCTEX1D1Q8N7M0 179 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 OR11H1Q8NG94 326 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 MRAPQ8TCY5 172 aa19.17■□□□□ 0.66
UPF3A-209ENST00000492270 ALX4Q9H161 411 aaPredicted RBP19.17■□□□□ 0.66
UPF3A-209ENST00000492270 EIF4EP06730 217 aaKnown RBP19.16■□□□□ 0.66
UPF3A-209ENST00000492270 AADACP22760 399 aa19.16■□□□□ 0.66
UPF3A-209ENST00000492270 FCGR2CP31995 323 aa19.16■□□□□ 0.66
UPF3A-209ENST00000492270 TAS2R20P59543 309 aa19.16■□□□□ 0.66
UPF3A-209ENST00000492270 AKIRIN2Q53H80 203 aa19.16■□□□□ 0.66
UPF3A-209ENST00000492270 TMEM69Q5SWH9 247 aa19.16■□□□□ 0.66
UPF3A-209ENST00000492270 FCGR3BO75015 233 aa19.15■□□□□ 0.66
UPF3A-209ENST00000492270 EIF4EBP1Q13541 118 aaPredicted RBP19.15■□□□□ 0.66
UPF3A-209ENST00000492270 ASPHD1Q5U4P2 390 aa19.15■□□□□ 0.66
UPF3A-209ENST00000492270 IDO2Q6ZQW0 420 aa19.15■□□□□ 0.66
UPF3A-209ENST00000492270 KCTD12Q96CX2 325 aaKnown RBP19.15■□□□□ 0.66
UPF3A-209ENST00000492270 MS4A10Q96PG2 267 aa19.15■□□□□ 0.66
UPF3A-209ENST00000492270 GPHA2Q96T91 129 aa19.15■□□□□ 0.66
UPF3A-209ENST00000492270 MCRIP2Q9BUT9 160 aaKnown RBP19.15■□□□□ 0.66
UPF3A-209ENST00000492270 COMMD3Q9UBI1 195 aa19.15■□□□□ 0.66
UPF3A-209ENST00000492270 SLC22A5O76082 557 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 CNIH1O95406 144 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 CBX5P45973 191 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 RUNX1Q01196 453 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 EGFEM1PQ0D2K5 195 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 OVCH2Q7RTZ1 564 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 OR5M8Q8NGP6 311 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 SECTM1Q8WVN6 248 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 CCL28Q9NRJ3 127 aa19.14■□□□□ 0.65
UPF3A-209ENST00000492270 PPYP01298 95 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 UBE2KP61086 200 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 VMA21Q3ZAQ7 101 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 OR5AP2Q8NGF4 316 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 OR1N2Q8NGR9 330 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 OSR1Q8TAX0 266 aaPredicted RBP19.13■□□□□ 0.65
UPF3A-209ENST00000492270 IFT46Q9NQC8 304 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 TAS2R8Q9NYW2 309 aa19.13■□□□□ 0.65
UPF3A-209ENST00000492270 K7EIL1 84 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 SAA1P0DJI8 122 aaPredicted RBP19.12■□□□□ 0.65
UPF3A-209ENST00000492270 CTF1Q16619 201 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 PYHIN1Q6K0P9 492 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 ANKRD13BQ86YJ7 626 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 TEX45Q8NA69 505 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 TCTEX1D2Q8WW35 142 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 DCUN1D5Q9BTE7 237 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 GPR61Q9BZJ8 451 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 PRELID3BQ9Y3B1 194 aa19.12■□□□□ 0.65
UPF3A-209ENST00000492270 WI2-2373I1.2A0A1W2PRP0 233 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 TNFSF12O43508 249 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 GABARAPO95166 117 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 IGHV3-11P01762 117 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 APELAP0DMC3 54 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 BRWD1-AS2P59051 145 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 TPPP2P59282 170 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 FXYD4P59646 89 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 ZNF616Q08AN1 781 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 CDK10Q15131 360 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 TNXAQ16473 311 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 OR5T1Q8NG75 326 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 DPF1Q92782 380 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 HSD17B10Q99714 261 aaKnown RBP19.11■□□□□ 0.65
UPF3A-209ENST00000492270 ANAPC10Q9UM13 185 aa19.11■□□□□ 0.65
UPF3A-209ENST00000492270 LGALS1P09382 135 aaKnown RBP19.1■□□□□ 0.65
UPF3A-209ENST00000492270 PRSS8Q16651 343 aa19.1■□□□□ 0.65
UPF3A-209ENST00000492270 GPR107Q5VW38 600 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms