RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ARL3P36405 182 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 ELLP55199 621 aaPredicted RBP5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 SLC25A30Q5SVS4 291 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 AADACL4Q5VUY2 407 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 OR2T5Q6IEZ7 315 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 CGB2Q6NT52 195 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 ZNF529Q6P280 563 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 C19orf35Q6ZS72 473 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 STX19Q8N4C7 294 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 DRAXINQ8NBI3 349 aaPredicted RBP5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 OR51A2Q8NGJ7 313 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 OR13C3Q8NGS6 347 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 OR2T29Q8NH02 315 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 ABHD14BQ96IU4 210 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 REEP1Q9H902 201 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 EFCAB1Q9HAE3 211 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 TVP23BQ9NYZ1 205 aa5.05□□□□□ -1.6
PDLIM1-203ENST00000490391 OR4C45A6NMZ5 311 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 M0R129 80 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 IGHV3-23P01764 117 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 SMR3BP02814 79 aaPredicted RBP5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 HSD17B1P14061 328 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 EFNB1P98172 346 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 CLEC19AQ6UXS0 136 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 PDPNQ86YL7 162 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 TTC9CQ8N5M4 171 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 PARP16Q8N5Y8 322 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 MRPL30Q8TCC3 161 aaKnown RBP5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 GIPC3Q8TF64 312 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 DYDC1Q8WWB3 177 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 SRSF12Q8WXF0 261 aaKnown RBP5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 C17orf77Q96MU5 243 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 PHB2Q99623 299 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 FAM192AQ9GZU8 254 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 S4R3C0 116 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 V9GYY5 206 aaPredicted RBP5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 MUC2Q02817 5179 aa5.04□□□□□ -1.6
PDLIM1-203ENST00000490391 SRRM4A7MD48 611 aaKnown RBP5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 ITGB1BP1O14713 200 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 CA11O75493 328 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 OR2T7P0C7T2 308 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 BTF3P20290 206 aaKnown RBP5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 FAM3BP58499 235 aaPredicted RBP5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 RPS27AP62979 156 aaKnown RBP5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 ZNF85Q03923 595 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 HMGN3Q15651 99 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 KLK9Q2XQG4 91 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 TP53I3Q53FA7 332 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 NXNL2Q5VZ03 156 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 RAB12Q6IQ22 244 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 Q6ZSN1 163 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 ZNRF2Q8NHG8 242 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 PELI1Q96FA3 418 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 FAM210BQ96KR6 192 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 GPER1Q99527 375 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 RNF167Q9H6Y7 350 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 SPACA1Q9HBV2 294 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 GNG8Q9UK08 70 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 KLK9Q9UKQ9 250 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 RAB21Q9UL25 225 aa5.03□□□□□ -1.6
PDLIM1-203ENST00000490391 TCRBV5S2A0A599 114 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 MCRIP1C9JLW8 97 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 MPPED1O15442 326 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 GPX5O75715 221 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 CTSDP07339 412 aaPredicted RBP5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 MYOD1P15172 320 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 SERPINA2P20848 420 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 ATP6V1B2P21281 511 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 PSMB6P28072 239 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 CCR9P51686 369 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 PRSS8Q16651 343 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 GLT8D1Q68CQ7 371 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 SIGIRRQ6IA17 410 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 LAMTOR1Q6IAA8 161 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 MORN3Q6PF18 240 aaPredicted RBP5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 HS3ST5Q8IZT8 346 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 CENPSQ8N2Z9 138 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 OR5D14Q8NGL3 314 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 TMEM163Q8TC26 289 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 TMEM190Q8WZ59 177 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 GALMQ96C23 342 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 CPNE2Q96FN4 548 aaPredicted RBP5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 OR14A2Q96R54 314 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 YTHDF1Q9BYJ9 559 aaKnown RBP5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF436Q9C0F3 470 aaPredicted RBP5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 METTL9Q9H1A3 318 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 ISG20L2Q9H9L3 353 aaKnown RBP5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 SLC2A9Q9NRM0 540 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 KCNIP1Q9NZI2 227 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 UFC1Q9Y3C8 167 aa5.02□□□□□ -1.61
PDLIM1-203ENST00000490391 IGHV3-35A0A0C4DH35 117 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 MFSD2BA6NFX1 497 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 TGOLN2O43493 480 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 APOA2P02652 100 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 CLEC3BP05452 202 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 RAB3AP20336 220 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 C4BPBP20851 252 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 CAPGP40121 348 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 TNXAQ16473 311 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms