RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 RNF5Q99942 180 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 RASL11BQ9BPW5 248 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 TPSG1Q9NRR2 321 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 LINC00527Q9UJ94 153 aa11.36□□□□□ -0.59
SRGAP3-208ENST00000490348 FCN1O00602 326 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 ZNF735P0CB33 412 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TBPP20226 339 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TAS2R19P59542 299 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TSPAN5P62079 268 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TAGLNQ01995 201 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TMEM177Q53S58 311 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 ARSJQ5FYB0 599 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 RNASE10Q5GAN6 216 aaKnown RBP11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 STEAP1BQ6NZ63 245 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 SHISA2Q6UWI4 295 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TRIM63Q969Q1 353 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 MRGPRFQ96AM1 343 aa11.35□□□□□ -0.59
SRGAP3-208ENST00000490348 TNCP24821 2201 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 IGHV7-81A0A0B4J1V7 117 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 FCGR3BO75015 233 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 CRYZL1O95825 349 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 HLA-DRB1P01911 266 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 NDPQ00604 133 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 RTL8BQ17RB0 113 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 MRGPRG-AS1Q2M3A8 158 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 ZNF66Q6ZN08 573 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 SLC35E3Q7Z769 313 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 C11orf44Q8N8P7 122 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 ZBTB34Q8NCN2 500 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 TCTEX1D2Q8WW35 142 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 HARBI1Q96MB7 349 aa11.34□□□□□ -0.59
SRGAP3-208ENST00000490348 ANKRD20A5PA0PJZ0 165 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SLC25A17O43808 307 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 RAMP3O60896 148 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 RAB3DO95716 219 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 CRYGBP07316 175 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 CSF1P09603 554 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SSBP2P81877 361 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 CNPY1Q3B7I2 92 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 PYDC2Q56P42 97 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 TCTEX1D4Q5JR98 221 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 LIN54Q6MZP7 749 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 Q8N402 240 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 OR4C16Q8NGL9 310 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 THAP7Q9BT49 309 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SRRQ9GZT4 340 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 KIAA1456Q9P272 454 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 METTL1Q9UBP6 276 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 PGLYRP1O75594 196 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SPDEFO95238 335 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 IFNA6P05013 189 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 RRASP10301 218 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 CD28P10747 220 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 PTBP1P26599 531 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 LGALS7P47929 136 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 PJVKQ0ZLH3 352 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 TSNAXQ99598 290 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SDHCQ99643 169 aaPredicted RBP11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 RSRP1Q9BUV0 290 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 PRELID3BQ9Y3B1 194 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 FBXO7Q9Y3I1 522 aa11.33□□□□□ -0.6
SRGAP3-208ENST00000490348 SHOXO15266 292 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 RLN1P04808 185 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 IGF1P05019 195 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 UCP3P55916 312 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 KLF9Q13886 244 aaPredicted RBP11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 PHLDA2Q53GA4 152 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 IDO2Q6ZQW0 420 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 VKORC1L1Q8N0U8 176 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 STPG2Q8N412 459 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 OR51H1Q8NH63 302 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 CLCC1Q96S66 551 aa11.32□□□□□ -0.6
SRGAP3-208ENST00000490348 AP4M1O00189 453 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 GPR31O00270 319 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 ATP6V0E1O15342 81 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 KCNAB3O43448 404 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 CA2P00918 260 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 AKAIN1P0CW23 69 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 EGR2P11161 476 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 PI3P19957 117 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 CX3CL1P78423 397 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 CFHR3Q02985 330 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 CBX3Q13185 183 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 PLGLAQ15195 96 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 SCGB2B2Q4G0G5 96 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 CENPVQ7Z7K6 275 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 OR5AU1Q8NGC0 362 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 OR4S2Q8NH73 311 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 TERB2Q8NHR7 220 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 OR51J1Q9H342 316 aa11.31□□□□□ -0.6
SRGAP3-208ENST00000490348 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 PPP5CP53041 499 aa11.3□□□□□ -0.6
SRGAP3-208ENST00000490348 UBE2KP61086 200 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms