RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-218	ENST00000490283		K7EIL1	84 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	RAMP3	O60896	148 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	VMA21	Q3ZAQ7	101 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	TMEM177	Q53S58	311 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	ZNF645	Q8N7E2	425 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	ZNF355P	Q9NSJ1	428 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	PRELID3B	Q9Y3B1	194 aa		13.57	□□□□□ -0.24
SEC13-218	ENST00000490283	WI2-2373I1.2	A0A1W2PRP0	233 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	AIRE	O43918	545 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	SOX15	O60248	233 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	EGR2	P11161	476 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	NFYA	P23511	347 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	DUT	P33316	252 aa	Known RBP	13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	TPPP2	P59282	170 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	KIAA0141	Q14154	515 aa	Predicted RBP	13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	OR5H6	Q8NGV6	325 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	TMEM68	Q96MH6	324 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	TPSG1	Q9NRR2	321 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	ANXA10	Q9UJ72	324 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	SPATA2	Q9UM82	520 aa		13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	MRPS7	Q9Y2R9	242 aa	Known RBP	13.56	□□□□□ -0.24
SEC13-218	ENST00000490283	CREBL2	O60519	120 aa	Predicted RBP	13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	CRYZL1	O95825	349 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	IGLV2-23	P01705	113 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	TRGV3	P03979	118 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	LGALS1	P09382	135 aa	Known RBP	13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	KCTD9	Q7L273	389 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	OSR1	Q8TAX0	266 aa	Predicted RBP	13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	CASTOR1	Q8WTX7	329 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	SLC25A38	Q96DW6	304 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	C5orf30	Q96GV9	206 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	MS4A10	Q96PG2	267 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	DCUN1D5	Q9BTE7	237 aa		13.55	□□□□□ -0.24
SEC13-218	ENST00000490283	LINC01619	G3V211	115 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283		H3BUA1	57 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	SSX5	O60225	188 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	TUSC2	O75896	110 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	HLA-DQB1	P01920	261 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	INSL3	P51460	131 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	TEX45	Q8NA69	505 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	BEST4	Q8NFU0	473 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	PHB2	Q99623	299 aa		13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	RBMX2	Q9Y388	322 aa	Known RBP	13.54	□□□□□ -0.24
SEC13-218	ENST00000490283	LINC00473	A8K010	186 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	OVOL1	O14753	267 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	ARPC1B	O15143	372 aa	Known RBP	13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	ACTL6B	O94805	426 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	CBX5	P45973	191 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	UBE2K	P61086	200 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	PJVK	Q0ZLH3	352 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	POC5	Q8NA72	575 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	DDB2	Q92466	427 aa		13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	S100A16	Q96FQ6	103 aa	Known RBP	13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	HSD17B10	Q99714	261 aa	Known RBP	13.53	□□□□□ -0.24
SEC13-218	ENST00000490283	ALX4	Q9H161	411 aa	Predicted RBP	13.53	□□□□□ -0.24
SEC13-218	ENST00000490283		A0A0G2JLM5	398 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	C13orf42	A0A1B0GVH6	325 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	MPPED1	O15442	326 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	FCGR3B	O75015	233 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	IGHV3-11	P01762	117 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	CRYGB	P07316	175 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	ECI1	P42126	302 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	LSM3	P62310	102 aa	Known RBP	13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	TNXA	Q16473	311 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	UBE2NL	Q5JXB2	153 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	HOGA1	Q86XE5	327 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	OR5T1	Q8NG75	326 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	TCTEX1D2	Q8WW35	142 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	ACOT12	Q8WYK0	555 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	YIPF6	Q96EC8	236 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	AUNIP	Q9H7T9	357 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	IFT46	Q9NQC8	304 aa		13.52	□□□□□ -0.25
SEC13-218	ENST00000490283	SRRM4	A7MD48	611 aa	Known RBP	13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	HSPB1	P04792	205 aa	Known RBP	13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	CD69	Q07108	199 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	PRSS8	Q16651	343 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	ASPHD1	Q5U4P2	390 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	OR4S2	Q8NH73	311 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	DCUN1D4	Q92564	292 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	COA4	Q9NYJ1	87 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	DNAH3	Q8TD57	4116 aa		13.51	□□□□□ -0.25
SEC13-218	ENST00000490283	IGHV4OR15-8	A0A075B7B6	117 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283		A0A087WW49	117 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	IGKV1D-13	A0A0B4J2D9	117 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	XRCC3	O43542	346 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	SAP30	O75446	220 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	IGKV1-13	P0DP09	117 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	AADAC	P22760	399 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	FCGR2C	P31995	323 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	TGFBR1	P36897	503 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	SLURP1	P55000	103 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	CDK10	Q15131	360 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	OR2B11	Q5JQS5	317 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	ZNF66	Q6ZN08	573 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	IDO2	Q6ZQW0	420 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	OVCH2	Q7RTZ1	564 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	ZNF429	Q86V71	674 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	GVQW1	Q8N7I0	195 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	SAMD12	Q8N8I0	201 aa		13.5	□□□□□ -0.25
SEC13-218	ENST00000490283	VSTM2A	Q8TAG5	236 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms