RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 C13orf42A0A1B0GVH6 325 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 MPTX1A8MV57 137 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 LEUTXA8MZ59 168 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 OOSP1A8MZH6 123 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 H0YJW9 148 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 FCGR3BO75015 233 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 S1PR2O95136 353 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 IGKV1-5P01602 117 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 APOA2P02652 100 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 GAPDHP04406 335 aaKnown RBP11.47□□□□□ -0.57
VPS26A-205ENST00000489656 P0C879 139 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 HTR1DP28221 377 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 CEACAM3P40198 252 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 IAH1Q2TAA2 248 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-205ENST00000489656 OR2B11Q5JQS5 317 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 ZBTB8BQ8NAP8 495 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-205ENST00000489656 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-205ENST00000489656 RANBP3Q9H6Z4 567 aaPredicted RBP11.47□□□□□ -0.57
VPS26A-205ENST00000489656 DPM3Q9P2X0 92 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
VPS26A-205ENST00000489656 CREBBPQ92793 2442 aa11.47□□□□□ -0.57
VPS26A-205ENST00000489656 ITPR3Q14573 2671 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 A0A1B0GU03 582 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 MC5RP33032 325 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 GZMKP49863 264 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 ARHGDIBP52566 201 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.57
VPS26A-205ENST00000489656 FGL1Q08830 312 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 DIAPH2-AS1Q14236 149 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 POU2AF1Q16633 256 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 ZFP69Q49AA0 526 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 TPTE2P1Q5T6R2 138 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 PDPNQ86YL7 162 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 SLC35D1Q9NTN3 355 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 COA4Q9NYJ1 87 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 MMP24Q9Y5R2 645 aa11.46□□□□□ -0.57
VPS26A-205ENST00000489656 AKAP9Q99996 3911 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 IGHV1-3A0A0C4DH29 117 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 FAM90A9PA6NNJ1 464 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 J3QLI3 93 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 NQO2P16083 231 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 EPHA1P21709 976 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 RAB13P51153 203 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 AKR1C2P52895 323 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 TMEM249Q2WGJ8 235 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 MIDNQ504T8 468 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 TMEM177Q53S58 311 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 LDLRAD2Q5SZI1 272 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 NOXA1Q86UR1 476 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 OR8H3Q8N146 312 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 OR4D5Q8NGN0 318 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 PPP1R1CQ8WVI7 109 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 LHX4Q969G2 390 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 RPEQ96AT9 228 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 R3HDM4Q96D70 268 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
VPS26A-205ENST00000489656 HYLS1Q96M11 299 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 ZFP57Q9NU63 452 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 HIF1ANQ9NWT6 349 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 WASHC3Q9Y3C0 194 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 AUP1Q9Y679 476 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 TNCP24821 2201 aa11.45□□□□□ -0.58
VPS26A-205ENST00000489656 ABCA1O95477 2261 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 TRAV14DV4A0A0A6YYC5 116 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 A0A0G2JRQ6 117 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 A0A1W2PPI3 338 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 MARCH11A6NNE9 402 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 SMLR1H3BR10 107 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 PITX3O75364 302 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 CRYZL1O95825 349 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 HRASP01112 189 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 IGHV4-31P0DP07 118 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 PSMB6P28072 239 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 REG1BP48304 166 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 HABP2Q14520 560 aaPredicted RBP11.44□□□□□ -0.58
VPS26A-205ENST00000489656 THOC7Q6I9Y2 204 aaKnown RBP11.44□□□□□ -0.58
VPS26A-205ENST00000489656 RNASE11Q8TAA1 199 aaKnown RBP11.44□□□□□ -0.58
VPS26A-205ENST00000489656 OSR1Q8TAX0 266 aaPredicted RBP11.44□□□□□ -0.58
VPS26A-205ENST00000489656 AIFM2Q9BRQ8 373 aa11.44□□□□□ -0.58
VPS26A-205ENST00000489656 CENPVL3A0A0U1RRI6 287 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 MPC2O95563 127 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 KRASP01116 189 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 SLC25A4P12235 298 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 G6PCP35575 357 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 LGALS4P56470 323 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 ERVK-16P61578 105 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 SMCO1Q147U7 214 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 Q5BKY6 102 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 CCDC144NLQ6NUI1 221 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 OR4C13Q8NGP0 309 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 MALSU1Q96EH3 234 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 C7orf69Q9H7B7 122 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 CCDC168Q8NDH2 2452 aa11.43□□□□□ -0.58
VPS26A-205ENST00000489656 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 HMSDA8MTL9 139 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 FAM90A26D6RGX4 464 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms