RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 MALSU1Q96EH3 234 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 GGACTQ9BVM4 153 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 GCM1Q9NP62 436 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 SIRT7Q9NRC8 400 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 KBTBD11-OT1A0A1B0GTJ5 212 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 H3BQ15 152 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 NQO2P16083 231 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 TNFRSF1AP19438 455 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 HOXA1P49639 335 aaPredicted RBP12.41□□□□□ -0.42
COL9A1-208ENST00000489611 TDGF1P3P51864 188 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 SPCS3P61009 180 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 STUMQ69YW2 141 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 OR8G2PQ6IF36 304 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF709Q8N972 641 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 HIST1H2BAQ96A08 127 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 TVP23CQ96ET8 276 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 RCC1LQ96I51 464 aaKnown RBP12.41□□□□□ -0.42
COL9A1-208ENST00000489611 S1PR3Q99500 378 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF665Q9H7R5 613 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 LINC00574Q9H8X3 128 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 CLN8Q9UBY8 286 aa12.41□□□□□ -0.42
COL9A1-208ENST00000489611 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
COL9A1-208ENST00000489611 USF3Q68DE3 2245 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 CACNA1DQ01668 2161 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 UBE2L5PA0A1B0GUS4 154 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 PMS2P5A8MQ11 134 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 VSTM5A8MXK1 200 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 DEFB108AA8MXU0 73 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 MPDU1O75352 247 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 IGHV1-46P01743 117 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 BMP5P22003 454 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 AKIRIN2Q53H80 203 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 VHLLQ6RSH7 139 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 CORO2AQ92828 525 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 VAX2Q9UIW0 290 aa12.4□□□□□ -0.42
COL9A1-208ENST00000489611 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.42
COL9A1-208ENST00000489611 SVILO95425 2214 aa12.4□□□□□ -0.43
COL9A1-208ENST00000489611 ZNF729A6NN14 1252 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-208ENST00000489611 M0R1X1 148 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 ZG16O60844 167 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 TFF1P04155 84 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 IFNA4P05014 189 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 CD55P08174 381 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 FAM27E3Q08E93 113 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 TEX36Q5VZQ5 186 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 NCR3LG1Q68D85 454 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 ALKBH2Q6NS38 261 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 DOLPP1Q86YN1 238 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 OR10A7Q8NGE5 316 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 OR4A16Q8NH70 328 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 IFI27L2Q9H2X8 130 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 ESRP2Q9H6T0 727 aaKnown RBP12.39□□□□□ -0.43
COL9A1-208ENST00000489611 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 GFOD1Q9NXC2 390 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 GNG13Q9P2W3 67 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 FCGR3BO75015 233 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 THBS3P49746 956 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 CYB561D1Q8N8Q1 229 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 DCTN5Q9BTE1 182 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
COL9A1-208ENST00000489611 IGHV3OR15-7A0A075B7D8 119 aa12.38□□□□□ -0.43
COL9A1-208ENST00000489611 CTXND1A0A1B0GTU2 59 aa12.38□□□□□ -0.43
COL9A1-208ENST00000489611 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
COL9A1-208ENST00000489611 HOXA4Q00056 320 aaPredicted RBP12.38□□□□□ -0.43
COL9A1-208ENST00000489611 ZNF788Q6ZQV5 615 aa12.38□□□□□ -0.43
COL9A1-208ENST00000489611 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
COL9A1-208ENST00000489611 PIEZO2Q9H5I5 2752 aa12.38□□□□□ -0.43
COL9A1-208ENST00000489611 PRR14LQ5THK1 2151 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 ZZEF1O43149 2961 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 PROP1O75360 226 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 OR2C1O95371 312 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 IFNA17P01571 189 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 RAB5AP20339 215 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 AGAP20933 346 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 ZNF726P1Q15940 193 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 FAM53AQ6NSI3 398 aaPredicted RBP12.37□□□□□ -0.43
COL9A1-208ENST00000489611 C1QL4Q86Z23 238 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 DDB2Q92466 427 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 RAB39BQ96DA2 213 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 C20orf24Q9BUV8 137 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 SAV1Q9H4B6 383 aaPredicted RBP12.37□□□□□ -0.43
COL9A1-208ENST00000489611 PRORYQ9H606 182 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 NGBQ9NPG2 151 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 JKAMPQ9P055 326 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 ZNF835Q9Y2P0 537 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 TRGV8A0A0C4DH27 118 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 A0A0G2JNJ9 132 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 NKX6-3A6NJ46 265 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 ARG1P05089 322 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 FGF7P21781 194 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 LTC4SQ16873 150 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 C17orf58Q2M2W7 97 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 LCN15Q6UWW0 184 aa12.37□□□□□ -0.43
COL9A1-208ENST00000489611 GFRALQ6UXV0 394 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms