RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CD40LGP29965 261 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 CDX1P47902 265 aaPredicted RBP10.48□□□□□ -0.73
CCL28-202ENST00000489442 FXYD4P59646 89 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 CFHR3Q02985 330 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 VMA21Q3ZAQ7 101 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 TMEM177Q53S58 311 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 UNQ5815/PRO19632Q6UWF5 114 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 C18orf65Q6ZTR6 163 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 SNX29P2Q8IUI4 249 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 GRPEL2Q8TAA5 225 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 TCTEX1D2Q8WW35 142 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 SNAPC3Q92966 411 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 HSD17B10Q99714 261 aaKnown RBP10.48□□□□□ -0.73
CCL28-202ENST00000489442 EHFQ9NZC4 300 aa10.48□□□□□ -0.73
CCL28-202ENST00000489442 A0A1W2PN81 502 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 NOL3O60936 208 aaKnown RBP10.47□□□□□ -0.73
CCL28-202ENST00000489442 PPYP01298 95 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 PSMB8P28062 276 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 PPIFP30405 207 aaKnown RBP10.47□□□□□ -0.73
CCL28-202ENST00000489442 CHRNA7P36544 502 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 MYCNOSP40205 109 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 RAB25P57735 213 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 TAS2R46P59540 309 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 HERV-K104P61576 105 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 NDPQ00604 133 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 FXYD3Q14802 87 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 ACTBL2Q562R1 376 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 OXLD1Q5BKU9 147 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 OR2B11Q5JQS5 317 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 TCTEX1D1Q8N7M0 179 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 RNF152Q8N8N0 203 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 WFDC9Q8NEX5 89 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 OR5H2Q8NGV7 314 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 OSR1Q8TAX0 266 aaPredicted RBP10.47□□□□□ -0.73
CCL28-202ENST00000489442 DDB2Q92466 427 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 ARPC1AQ92747 370 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 FAM103A1Q9BTL3 118 aaKnown RBP10.47□□□□□ -0.73
CCL28-202ENST00000489442 SLC5A7Q9GZV3 580 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 TPSG1Q9NRR2 321 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 TAS2R8Q9NYW2 309 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 FOXA2Q9Y261 457 aaPredicted RBP10.47□□□□□ -0.73
CCL28-202ENST00000489442 FBXO7Q9Y3I1 522 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 NUBP2Q9Y5Y2 271 aa10.47□□□□□ -0.73
CCL28-202ENST00000489442 TGP01266 2768 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 SRRM4A7MD48 611 aaKnown RBP10.46□□□□□ -0.73
CCL28-202ENST00000489442 RGS5O15539 181 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 IGLV2-23P01705 113 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 PMP2P02689 132 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 IGLL1P15814 213 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 RPL5P46777 297 aaKnown RBP10.46□□□□□ -0.73
CCL28-202ENST00000489442 RFX2P48378 723 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 RAB9AP51151 201 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 PJVKQ0ZLH3 352 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 AKIRIN2Q53H80 203 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 ZNF66Q6ZN08 573 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 TMEM17Q86X19 198 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 MFSD4AQ8N468 514 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 TEX45Q8NA69 505 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 MINDY2Q8NBR6 621 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 LFNGQ8NES3 379 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 RAB2BQ8WUD1 216 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 GIMAP1Q8WWP7 306 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 DUX3Q96PT4 197 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 KLK15Q9H2R5 256 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 SCPEP1Q9HB40 452 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 CCL28Q9NRJ3 127 aa10.46□□□□□ -0.73
CCL28-202ENST00000489442 CCL24O00175 119 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 TNFSF12O43508 249 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 ACTL6BO94805 426 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 IGLV2-14P01704 120 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 EGR2P11161 476 aaPredicted RBP10.45□□□□□ -0.74
CCL28-202ENST00000489442 HLA-DMAP28067 261 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 CRIP2P52943 208 aaPredicted RBP10.45□□□□□ -0.74
CCL28-202ENST00000489442 TMBIM6P55061 237 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 UBE2KP61086 200 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 RPL30P62888 115 aaKnown RBP10.45□□□□□ -0.74
CCL28-202ENST00000489442 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 PYHIN1Q6K0P9 492 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 IDO2Q6ZQW0 420 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 MRPL41Q8IXM3 137 aaKnown RBP10.45□□□□□ -0.74
CCL28-202ENST00000489442 ZBTB34Q8NCN2 500 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 OR4S2Q8NH73 311 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 BORCS5Q969J3 196 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 RCC1LQ96I51 464 aaKnown RBP10.45□□□□□ -0.74
CCL28-202ENST00000489442 UBE2E2Q96LR5 201 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 ZNF2Q9BSG1 426 aaPredicted RBP10.45□□□□□ -0.74
CCL28-202ENST00000489442 ZNF355PQ9NSJ1 428 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 EXTL2Q9UBQ6 330 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 VSIG4Q9Y279 399 aa10.45□□□□□ -0.74
CCL28-202ENST00000489442 CREBL2O60519 120 aaPredicted RBP10.44□□□□□ -0.74
CCL28-202ENST00000489442 DUS4LO95620 317 aaKnown RBP10.44□□□□□ -0.74
CCL28-202ENST00000489442 NAT1P18440 290 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 TSPAN5P62079 268 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 CATR1Q13166 79 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 DYRK1AQ13627 763 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 SPCS2Q15005 226 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 MSMO1Q15800 293 aa10.44□□□□□ -0.74
CCL28-202ENST00000489442 TNXAQ16473 311 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms