RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 GRPEL2Q8TAA5 225 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 ALX4Q9H161 411 aaPredicted RBP19.38■□□□□ 0.69
HMGN1-217ENST00000489072 ANXA10Q9UJ72 324 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 OR2W1Q9Y3N9 320 aa19.38■□□□□ 0.69
HMGN1-217ENST00000489072 IGKV1D-13A0A0B4J2D9 117 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 AIREO43918 545 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 HLA-DQB1P01920 261 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 IGKV1-13P0DP09 117 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 RTL8BQ17RB0 113 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 TIMM50Q3ZCQ8 353 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 ADTRPQ96IZ2 230 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 SPATA2Q9UM82 520 aa19.37■□□□□ 0.69
HMGN1-217ENST00000489072 SHOXO15266 292 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 RRASP10301 218 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 LSM3P62310 102 aaKnown RBP19.36■□□□□ 0.69
HMGN1-217ENST00000489072 ZNF616Q08AN1 781 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 CBX3Q13185 183 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 MRGPRG-AS1Q2M3A8 158 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 ZNF645Q8N7E2 425 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 GVQW1Q8N7I0 195 aa19.36■□□□□ 0.69
HMGN1-217ENST00000489072 A0A0A6YYH2 397 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 A6NJ64 397 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 IGLV2-14P01704 120 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 OR8U8P0C7N1 319 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 RPS19P39019 145 aaKnown RBP19.35■□□□□ 0.69
HMGN1-217ENST00000489072 PYHIN1Q6K0P9 492 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 MS4A10Q96PG2 267 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 AUNIPQ9H7T9 357 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 VCX3AQ9NNX9 186 aa19.35■□□□□ 0.69
HMGN1-217ENST00000489072 SEC14L6B5MCN3 397 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 TUSC2O75896 110 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 CRYZL1O95825 349 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 PTHLHP12272 177 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 C9orf66Q5T8R8 295 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 BEST4Q8NFU0 473 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 SCOCQ9UIL1 159 aa19.34■□□□□ 0.69
HMGN1-217ENST00000489072 RBMX2Q9Y388 322 aaKnown RBP19.34■□□□□ 0.69
HMGN1-217ENST00000489072 TRIM64CA6NLI5 447 aa19.33■□□□□ 0.68
HMGN1-217ENST00000489072 TMEM127O75204 238 aa19.33■□□□□ 0.68
HMGN1-217ENST00000489072 CNIH1O95406 144 aa19.33■□□□□ 0.68
HMGN1-217ENST00000489072 LGALS1P09382 135 aaKnown RBP19.33■□□□□ 0.68
HMGN1-217ENST00000489072 RPL30P62888 115 aaKnown RBP19.33■□□□□ 0.68
HMGN1-217ENST00000489072 DGCR2P98153 550 aa19.33■□□□□ 0.68
HMGN1-217ENST00000489072 HOGA1Q86XE5 327 aa19.33■□□□□ 0.68
HMGN1-217ENST00000489072 DIABLOQ9NR28 239 aa19.33■□□□□ 0.68
HMGN1-217ENST00000489072 IGHV3-11P01762 117 aa19.32■□□□□ 0.68
HMGN1-217ENST00000489072 TPPP2P59282 170 aa19.32■□□□□ 0.68
HMGN1-217ENST00000489072 UBE2KP61086 200 aa19.32■□□□□ 0.68
HMGN1-217ENST00000489072 DEFB121Q5J5C9 76 aa19.32■□□□□ 0.68
HMGN1-217ENST00000489072 IGHV4OR15-8A0A075B7B6 117 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 A0A087WW49 117 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 EIF4EBP1Q13541 118 aaPredicted RBP19.31■□□□□ 0.68
HMGN1-217ENST00000489072 VMA21Q3ZAQ7 101 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 IDO2Q6ZQW0 420 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 KCTD9Q7L273 389 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 CROCCP3Q8IVE0 287 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 TEX45Q8NA69 505 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 OR5T1Q8NG75 326 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 DCUN1D4Q92564 292 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 RHOVQ96L33 236 aa19.31■□□□□ 0.68
HMGN1-217ENST00000489072 DNAH9Q9NYC9 4486 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 FCGR3BO75015 233 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 SLC22A5O76082 557 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 TRGV3P03979 118 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 FCER2P06734 321 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 SLURP1P55000 103 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 ARPC4P59998 168 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 OR2B11Q5JQS5 317 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 OVCH2Q7RTZ1 564 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 POC5Q8NA72 575 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 OSR1Q8TAX0 266 aaPredicted RBP19.3■□□□□ 0.68
HMGN1-217ENST00000489072 SLA2Q9H6Q3 261 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 SORL1Q92673 2214 aa19.3■□□□□ 0.68
HMGN1-217ENST00000489072 LINC01619G3V211 115 aa19.29■□□□□ 0.68
HMGN1-217ENST00000489072 XRCC3O43542 346 aa19.29■□□□□ 0.68
HMGN1-217ENST00000489072 AADACP22760 399 aa19.29■□□□□ 0.68
HMGN1-217ENST00000489072 CD40LGP29965 261 aa19.29■□□□□ 0.68
HMGN1-217ENST00000489072 PRSS8Q16651 343 aa19.29■□□□□ 0.68
HMGN1-217ENST00000489072 SNAPC3Q92966 411 aa19.29■□□□□ 0.68
HMGN1-217ENST00000489072 DLX4Q92988 240 aaPredicted RBP19.29■□□□□ 0.68
HMGN1-217ENST00000489072 ZMAT5Q9UDW3 170 aaKnown RBP19.29■□□□□ 0.68
HMGN1-217ENST00000489072 MEIS3P1A6NDR6 274 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 SAA1P0DJI8 122 aaPredicted RBP19.28■□□□□ 0.68
HMGN1-217ENST00000489072 FCGR2CP31995 323 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 UBE2NLQ5JXB2 153 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 SAMD12Q8N8I0 201 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 GPHA2Q96T91 129 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 FUNDC2Q9BWH2 189 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 ZNF355PQ9NSJ1 428 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 PRELID3BQ9Y3B1 194 aa19.28■□□□□ 0.68
HMGN1-217ENST00000489072 H3BUA1 57 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 OVOL1O14753 267 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 RAMP3O60896 148 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 APELAP0DMC3 54 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 BRWD1-AS2P59051 145 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 TNXAQ16473 311 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 SLC25A46Q96AG3 418 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 S100A16Q96FQ6 103 aaKnown RBP19.27■□□□□ 0.68
HMGN1-217ENST00000489072 PRR25Q96S07 402 aa19.27■□□□□ 0.68
HMGN1-217ENST00000489072 HSD17B10Q99714 261 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms