RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 SHOXO15266 292 aa17.76■□□□□ 0.43
COL9A3-213ENST00000489045 CNIH1O95406 144 aa17.76■□□□□ 0.43
COL9A3-213ENST00000489045 TMEM177Q53S58 311 aa17.76■□□□□ 0.43
COL9A3-213ENST00000489045 HACD4Q5VWC8 232 aa17.76■□□□□ 0.43
COL9A3-213ENST00000489045 NUDCD2Q8WVJ2 157 aa17.76■□□□□ 0.43
COL9A3-213ENST00000489045 TMEM235A6NFC5 223 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 SRRM4A7MD48 611 aaKnown RBP17.75■□□□□ 0.43
COL9A3-213ENST00000489045 TRGV3P03979 118 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 RRASP10301 218 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 DUTP33316 252 aaKnown RBP17.75■□□□□ 0.43
COL9A3-213ENST00000489045 SDC2P34741 201 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 ZNF429Q86V71 674 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 POC5Q8NA72 575 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 DDB2Q92466 427 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 ADTRPQ96IZ2 230 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 RHOVQ96L33 236 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 ST6GALNAC5Q9BVH7 336 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 ZNF355PQ9NSJ1 428 aa17.75■□□□□ 0.43
COL9A3-213ENST00000489045 LINC00473A8K010 186 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 J3QRK9 145 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 SAP30O75446 220 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 LY86O95711 162 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 OR5T1Q8NG75 326 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 DCSTAMPQ9H295 470 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 RNF167Q9H6Y7 350 aa17.74■□□□□ 0.43
COL9A3-213ENST00000489045 SCGNO76038 276 aa17.73■□□□□ 0.43
COL9A3-213ENST00000489045 HSPB1P04792 205 aaKnown RBP17.73■□□□□ 0.43
COL9A3-213ENST00000489045 CLEC2LP0C7M8 214 aa17.73■□□□□ 0.43
COL9A3-213ENST00000489045 MXD1Q05195 221 aa17.73■□□□□ 0.43
COL9A3-213ENST00000489045 RHBDL2Q9NX52 303 aa17.73■□□□□ 0.43
COL9A3-213ENST00000489045 TNCP24821 2201 aa17.73■□□□□ 0.43
COL9A3-213ENST00000489045 H3BUA1 57 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 CRYZL1O95825 349 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 CTXN2P0C2S0 81 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 NFYAP23511 347 aaPredicted RBP17.72■□□□□ 0.43
COL9A3-213ENST00000489045 GNG2P59768 71 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 PITPNAQ00169 270 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 MRGPRG-AS1Q2M3A8 158 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 VMA21Q3ZAQ7 101 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 ZNF645Q8N7E2 425 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 OR2W1Q9Y3N9 320 aa17.72■□□□□ 0.43
COL9A3-213ENST00000489045 TENM3Q9P273 2699 aa17.71■□□□□ 0.43
COL9A3-213ENST00000489045 LOC100506127A0A0U1RQW1 187 aa17.71■□□□□ 0.43
COL9A3-213ENST00000489045 SSX5O60225 188 aa17.71■□□□□ 0.43
COL9A3-213ENST00000489045 UBE2KP61086 200 aa17.71■□□□□ 0.43
COL9A3-213ENST00000489045 NEDD8Q15843 81 aa17.71■□□□□ 0.43
COL9A3-213ENST00000489045 ACSM6Q6P461 480 aa17.71■□□□□ 0.43
COL9A3-213ENST00000489045 C13orf42A0A1B0GVH6 325 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 HLA-DQB1P01920 261 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 CNIH2Q6PI25 160 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 IDO2Q6ZQW0 420 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 TEX45Q8NA69 505 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 OR5H6Q8NGV6 325 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 TMEM68Q96MH6 324 aa17.7■□□□□ 0.42
COL9A3-213ENST00000489045 NHLRC4P0CG21 123 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-213ENST00000489045 APELAP0DMC3 54 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 CD36P16671 472 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 DEFA5Q01523 94 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 TNXAQ16473 311 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 PRSS8Q16651 343 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 IDNKQ5T6J7 187 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 KCTD9Q7L273 389 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 OSR1Q8TAX0 266 aaPredicted RBP17.69■□□□□ 0.42
COL9A3-213ENST00000489045 SLC25A38Q96DW6 304 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 PHB2Q99623 299 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 ANXA10Q9UJ72 324 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 ETV7Q9Y603 341 aa17.69■□□□□ 0.42
COL9A3-213ENST00000489045 IGKV1D-13A0A0B4J2D9 117 aa17.68■□□□□ 0.42
COL9A3-213ENST00000489045 A0A0G2JLM5 398 aa17.68■□□□□ 0.42
COL9A3-213ENST00000489045 IGKV1-13P0DP09 117 aa17.68■□□□□ 0.42
COL9A3-213ENST00000489045 SCAND1P57086 179 aa17.68■□□□□ 0.42
COL9A3-213ENST00000489045 KCTD21Q4G0X4 260 aa17.68■□□□□ 0.42
COL9A3-213ENST00000489045 TINAGL1Q9GZM7 467 aaPredicted RBP17.68■□□□□ 0.42
COL9A3-213ENST00000489045 COA4Q9NYJ1 87 aa17.68■□□□□ 0.42
COL9A3-213ENST00000489045 RBMX2Q9Y388 322 aaKnown RBP17.68■□□□□ 0.42
COL9A3-213ENST00000489045 ANKRD34BA5PLL1 514 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 MSGN1A6NI15 193 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 FCGR3BO75015 233 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 TUSC2O75896 110 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 IGLV2-14P01704 120 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 SAA1P0DJI8 122 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-213ENST00000489045 SPNP16150 400 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 OR2B11Q5JQS5 317 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 OR6Q1Q8NGQ2 317 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 SRSF12Q8WXF0 261 aaKnown RBP17.67■□□□□ 0.42
COL9A3-213ENST00000489045 ACOT12Q8WYK0 555 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 WWC2-AS2Q96NR7 200 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 OR4C12Q96R67 309 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 ASCL2Q99929 193 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 DCUN1D5Q9BTE7 237 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 RANGRFQ9HD47 186 aaPredicted RBP17.67■□□□□ 0.42
COL9A3-213ENST00000489045 PRELID3BQ9Y3B1 194 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 SMAD5-AS1Q9Y6J3 95 aa17.67■□□□□ 0.42
COL9A3-213ENST00000489045 TRAV18A0A075B6X5 111 aa17.66■□□□□ 0.42
COL9A3-213ENST00000489045 SLC22A5O76082 557 aa17.66■□□□□ 0.42
COL9A3-213ENST00000489045 BRI3O95415 125 aa17.66■□□□□ 0.42
COL9A3-213ENST00000489045 RPL30P62888 115 aaKnown RBP17.66■□□□□ 0.42
COL9A3-213ENST00000489045 MRPS7Q9Y2R9 242 aaKnown RBP17.66■□□□□ 0.42
COL9A3-213ENST00000489045 GP9P14770 177 aa17.65■□□□□ 0.42
COL9A3-213ENST00000489045 ZP3P21754 424 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms