RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 FCGR3BO75015 233 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 HPRT1P00492 218 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 IGKV1-39P01597 117 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 IGKV1D-39P04432 117 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 SERPINE2P07093 398 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 CD1BP29016 333 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 RAB13P51153 203 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 RTL8BQ17RB0 113 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 BRD3OSQ6XYD6 125 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 SELENOHQ8IZQ5 122 aaKnown RBP12.9□□□□□ -0.34
CLDN11-208ENST00000488989 OR4S2Q8NH73 311 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 PLEKHA2Q9HB19 425 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 PRR13Q9NZ81 148 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 COMMD9Q9P000 198 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 WASHC3Q9Y3C0 194 aa12.9□□□□□ -0.34
CLDN11-208ENST00000488989 SETXQ7Z333 2677 aaKnown RBP12.9□□□□□ -0.34
CLDN11-208ENST00000488989 NAV3Q8IVL0 2385 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 SVEP1Q4LDE5 3571 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
CLDN11-208ENST00000488989 TIMM23O14925 209 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 CD99P14209 185 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 HLA-GP17693 338 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 LPAR6P43657 344 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 DYNLT3P51808 116 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 RRAS2P62070 204 aaPredicted RBP12.89□□□□□ -0.35
CLDN11-208ENST00000488989 EBI3Q14213 229 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 TMEM177Q53S58 311 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 OR2B11Q5JQS5 317 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 MOB3BQ86TA1 216 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 CADM3Q8N126 398 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 CHAC2Q8WUX2 184 aa12.89□□□□□ -0.35
CLDN11-208ENST00000488989 RBPMSQ93062 196 aaKnown RBP12.89□□□□□ -0.35
CLDN11-208ENST00000488989 A0A0U1RQK1 487 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 VGLL3A8MV65 326 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 S1PR2O95136 353 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 ARHGDIBP52566 201 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 POU2AF1Q16633 256 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 TUSC1Q2TAM9 212 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 FAM120AOSQ5T036 256 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 LIN54Q6MZP7 749 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 ZNF695Q8IW36 515 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 OSR1Q8TAX0 266 aaPredicted RBP12.88□□□□□ -0.35
CLDN11-208ENST00000488989 RNF5Q99942 180 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
CLDN11-208ENST00000488989 SSNA1O43805 119 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 VENTXO95231 258 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 CRYZL1O95825 349 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 LY6G6DO95868 133 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 IGKV1-16P04430 117 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 FBP1P09467 338 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 TRAPPC2P0DI81 140 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 TRAPPC2BP0DI82 140 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 SULT1A3P0DMM9 295 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 SULT1A4P0DMN0 295 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 PAX6P26367 422 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 AANATQ16613 207 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 SLC35G3Q8N808 338 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 OR4C13Q8NGP0 309 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 LSM10Q969L4 123 aaKnown RBP12.87□□□□□ -0.35
CLDN11-208ENST00000488989 SEC22AQ96IW7 307 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 MED28Q9H204 178 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 RAB18Q9NP72 206 aa12.87□□□□□ -0.35
CLDN11-208ENST00000488989 IGHV3-72A0A0B4J1Y9 119 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 HMX3A6NHT5 357 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 H7C2Y5 167 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 ATG12O94817 140 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 IGKV1-5P01602 117 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 P0C879 139 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 NQO2P16083 231 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 VDAC1P21796 283 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 BRS3P32247 399 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 BCAP31P51572 246 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 FCN2Q15485 313 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 C2orf68Q2NKX9 166 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 FLYWCH2Q96CP2 140 aaKnown RBP12.86□□□□□ -0.35
CLDN11-208ENST00000488989 SMR3AQ99954 134 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 MS4A7Q9GZW8 240 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-208ENST00000488989 PRDM13Q9H4Q3 707 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 TMED3Q9Y3Q3 217 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 SOX21Q9Y651 276 aaPredicted RBP12.86□□□□□ -0.35
CLDN11-208ENST00000488989 TNCP24821 2201 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 HIVEP1P15822 2718 aa12.86□□□□□ -0.35
CLDN11-208ENST00000488989 SONP18583 2426 aaKnown RBP12.86□□□□□ -0.35
CLDN11-208ENST00000488989 hCG_2014768A0A024R1R8 64 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 HRASP01112 189 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 IL6RP08887 468 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-208ENST00000488989 LGALS7P47929 136 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 NMSQ5H8A3 153 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 FAM219AQ8IW50 185 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 BCL6BQ8N143 479 aaPredicted RBP12.85□□□□□ -0.35
CLDN11-208ENST00000488989 Q8N6K4 173 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 UXS1Q8NBZ7 420 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 R3HDM4Q96D70 268 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 AIFM2Q9BRQ8 373 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 FAM96BQ9Y3D0 163 aa12.85□□□□□ -0.35
CLDN11-208ENST00000488989 MARCH11A6NNE9 402 aa12.84□□□□□ -0.35
CLDN11-208ENST00000488989 SRRM4A7MD48 611 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms