RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 SLC2A8Q9NY64 477 aa12.71□□□□□ -0.37
HDAC7-224ENST00000488927 SCP2D1Q9UJQ7 156 aa12.71□□□□□ -0.37
HDAC7-224ENST00000488927 NDUFA3O95167 84 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 AMY1AP04745 511 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 ZNF735P0CB33 412 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 F2RL1P55085 397 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 LINC00205P59089 165 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 KLF9Q13886 244 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-224ENST00000488927 SURF2Q15527 256 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-224ENST00000488927 TMEM177Q53S58 311 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 AWAT1Q58HT5 328 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 TCTEX1D1Q8N7M0 179 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 Q8N9W7 124 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 OR4S2Q8NH73 311 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 OSR1Q8TAX0 266 aaPredicted RBP12.7□□□□□ -0.38
HDAC7-224ENST00000488927 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 CD300LFQ8TDQ1 290 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 AKIP1Q9NQ31 210 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 MCUBQ9NWR8 336 aa12.7□□□□□ -0.38
HDAC7-224ENST00000488927 SHOXO15266 292 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 RBFOX2O43251 390 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC7-224ENST00000488927 TNFSF12O43508 249 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 FCGR3BO75015 233 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 PGAM2P15259 253 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 MDKP21741 143 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-224ENST00000488927 RPL30P62888 115 aaKnown RBP12.69□□□□□ -0.38
HDAC7-224ENST00000488927 ZNF57Q68EA5 555 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-224ENST00000488927 C12orf54Q6X4T0 127 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 HARBI1Q96MB7 349 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 SCGB3A2Q96PL1 93 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 AIFM2Q9BRQ8 373 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 CCDC32Q9BV29 185 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 WDR12Q9GZL7 423 aaKnown RBP12.69□□□□□ -0.38
HDAC7-224ENST00000488927 RNF114Q9Y508 228 aa12.69□□□□□ -0.38
HDAC7-224ENST00000488927 COL6A5A8TX70 2615 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 RRHO14718 337 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 KCNAB3O43448 404 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 PEX14O75381 377 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 PGLYRP1O75594 196 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-224ENST00000488927 CRYZL1O95825 349 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 VDAC2P45880 294 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-224ENST00000488927 PPP5CP53041 499 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 PLGLAQ15195 96 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 BAK1Q16611 211 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 C5orf64Q2M2E5 130 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 C9orf152Q5JTZ5 239 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 FAAP20Q6NZ36 180 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 IDO2Q6ZQW0 420 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 OR51S1Q8NGJ8 323 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 TAF15Q92804 592 aaKnown RBP eCLIP12.68□□□□□ -0.38
HDAC7-224ENST00000488927 RITA1Q96K30 269 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 HRASLSQ9HDD0 168 aa12.68□□□□□ -0.38
HDAC7-224ENST00000488927 NAP1L6A6NFF2 107 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 CENPXA8MT69 81 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 IGHG2P01859 326 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 HLA-DRB1P01911 266 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 RLN1P04808 185 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 CD40LGP29965 261 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 RND3P61587 244 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 PSG5Q15238 335 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 VMA21Q3ZAQ7 101 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 LIN54Q6MZP7 749 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 SPAG16Q8N0X2 631 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 CCDC71LQ8N9Z2 235 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 OR51H1Q8NH63 302 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 SDHCQ99643 169 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-224ENST00000488927 SLC2A9Q9NRM0 540 aa12.67□□□□□ -0.38
HDAC7-224ENST00000488927 FAM212BQ9NTI7 297 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-224ENST00000488927 C14orf166Q9Y224 244 aaKnown RBP12.67□□□□□ -0.38
HDAC7-224ENST00000488927 HRASP01112 189 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-224ENST00000488927 IL7P13232 177 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 F2RP25116 425 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 CNTFRP26992 372 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 ZNF846Q147U1 533 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 PHLDA2Q53GA4 152 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 OR2B11Q5JQS5 317 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 SLC35E3Q7Z769 313 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 FOXRED2Q8IWF2 684 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 OR13C8Q8NGS7 320 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 VSTM2AQ8TAG5 236 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 MARCH1Q8TCQ1 289 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 C7orf50Q9BRJ6 194 aaKnown RBP12.66□□□□□ -0.38
HDAC7-224ENST00000488927 COPZ2Q9P299 210 aa12.66□□□□□ -0.38
HDAC7-224ENST00000488927 METTL1Q9UBP6 276 aaKnown RBP12.66□□□□□ -0.38
HDAC7-224ENST00000488927 CREBL2O60519 120 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-224ENST00000488927 B3GALNT1O75752 331 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 HPRT1P00492 218 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 PIGPP57054 158 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 PROK1P58294 105 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 TAS2R31P59538 309 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 UBE2KP61086 200 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 Q6ZS46 218 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 TBC1D26Q86UD7 250 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 C3orf56Q8N813 242 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 TEX45Q8NA69 505 aa12.65□□□□□ -0.38
HDAC7-224ENST00000488927 RBMXL1Q96E39 390 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms