RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	NDUFB11	Q9NX14	153 aa		14.05	□□□□□ -0.16
ATG9A-222	ENST00000488833		A0A0G2JLM5	398 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	ERICH4	A6NGS2	130 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	C3orf84	H3BNL1	204 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	RAB27B	O00194	218 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	CRYGB	P07316	175 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	RAB3B	P20337	219 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	TALDO1	P37837	337 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	TAGLN	Q01995	201 aa	Known RBP	14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	ARFRP1	Q13795	201 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	TMEM177	Q53S58	311 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	TNC	P24821	2201 aa		14.04	□□□□□ -0.16
ATG9A-222	ENST00000488833	METTL21EP	A6NDL7	271 aa		14.03	□□□□□ -0.16
ATG9A-222	ENST00000488833	RRAS	P10301	218 aa		14.03	□□□□□ -0.16
ATG9A-222	ENST00000488833	ANKRD13B	Q86YJ7	626 aa		14.03	□□□□□ -0.16
ATG9A-222	ENST00000488833	TMEM68	Q96MH6	324 aa		14.03	□□□□□ -0.16
ATG9A-222	ENST00000488833	PHB2	Q99623	299 aa		14.03	□□□□□ -0.16
ATG9A-222	ENST00000488833	COA4	Q9NYJ1	87 aa		14.03	□□□□□ -0.16
ATG9A-222	ENST00000488833	TRDV1	A0A1B0GX56	115 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	SRRM4	A7MD48	611 aa	Known RBP	14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	IGLV1-51	P01701	117 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	APELA	P0DMC3	54 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	VMA21	Q3ZAQ7	101 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	C22orf42	Q6IC83	251 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	H1FOO	Q8IZA3	346 aa	Predicted RBP	14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	ADTRP	Q96IZ2	230 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	TINAGL1	Q9GZM7	467 aa	Predicted RBP	14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	ATG5	Q9H1Y0	275 aa		14.02	□□□□□ -0.17
ATG9A-222	ENST00000488833	IGKV1D-8	A0A087WSZ0	117 aa		14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	SMIM30	A4D0T7	59 aa		14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	CRYZL1	O95825	349 aa		14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	DUT	P33316	252 aa	Known RBP	14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	TNXA	Q16473	311 aa		14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	MUC7	Q8TAX7	377 aa		14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	ZMAT4	Q9H898	229 aa		14.01	□□□□□ -0.17
ATG9A-222	ENST00000488833	LINC00473	A8K010	186 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	AADAC	P22760	399 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	SYNJ2BP	P57105	145 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	UBE2K	P61086	200 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	PRSS8	Q16651	343 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	IDO2	Q6ZQW0	420 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833		Q6ZS49	121 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	NR2C2AP	Q86WQ0	139 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	DDB2	Q92466	427 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	CENPO	Q9BU64	300 aa		14	□□□□□ -0.17
ATG9A-222	ENST00000488833	ELF5	Q9UKW6	265 aa	Predicted RBP	14	□□□□□ -0.17
ATG9A-222	ENST00000488833	MSGN1	A6NI15	193 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833		J3QRK9	145 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	MPPED1	O15442	326 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	BRI3	O95415	125 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	IGHV4-30-4	P0DP06	118 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	DTYMK	P23919	212 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	DYRK1A	Q13627	763 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	KLF5	Q13887	457 aa	Predicted RBP	13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	ARL6IP1	Q15041	203 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	MRGPRG-AS1	Q2M3A8	158 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	SGPP2	Q8IWX5	399 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	TEX45	Q8NA69	505 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	OR9G4	Q8NGQ1	327 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	SRSF12	Q8WXF0	261 aa	Known RBP	13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	ACOT12	Q8WYK0	555 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	USMG5	Q96IX5	58 aa		13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	PEF1	Q9UBV8	284 aa	Known RBP	13.99	□□□□□ -0.17
ATG9A-222	ENST00000488833	TRBV12-3	P01733	135 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	GAL	P22466	123 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	GABARAPL2	P60520	117 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	CDNF	Q49AH0	187 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	ZNF343	Q6P1L6	599 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833		Q8N1Y9	231 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	ADAD2	Q8NCV1	583 aa	Known RBP	13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	OSR1	Q8TAX0	266 aa	Predicted RBP	13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	ADAM30	Q9UKF2	790 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	RAB26	Q9ULW5	256 aa		13.98	□□□□□ -0.17
ATG9A-222	ENST00000488833	OR9G9	P0C7N8	305 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	SAA1	P0DJI8	122 aa	Predicted RBP	13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	PSMB9	P28065	219 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	RPEL1	Q2QD12	228 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	CASC10	Q5T4H9	136 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	ZNF645	Q8N7E2	425 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	NUDCD2	Q8WVJ2	157 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	ST6GALNAC5	Q9BVH7	336 aa		13.97	□□□□□ -0.17
ATG9A-222	ENST00000488833	NOTO	A8MTQ0	251 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833		H0Y980	276 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	CREBL2	O60519	120 aa	Predicted RBP	13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	RBMXL2	O75526	392 aa	Known RBP	13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	ACTL6B	O94805	426 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	NFYA	P23511	347 aa	Predicted RBP	13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	CDK10	Q15131	360 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	TATDN3	Q17R31	274 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	UBE2U	Q5VVX9	321 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	HACD4	Q5VWC8	232 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	IL34	Q6ZMJ4	242 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	KCTD9	Q7L273	389 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	TM2D3	Q9BRN9	247 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	DCUN1D5	Q9BTE7	237 aa		13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	TXNL4B	Q9NX01	149 aa	Known RBP	13.96	□□□□□ -0.17
ATG9A-222	ENST00000488833	TMEM235	A6NFC5	223 aa		13.95	□□□□□ -0.18
ATG9A-222	ENST00000488833	MRPS14	O60783	128 aa	Known RBP	13.95	□□□□□ -0.18
ATG9A-222	ENST00000488833	FCGR3B	O75015	233 aa		13.95	□□□□□ -0.18

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