RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 SSBP2P81877 361 aaPredicted RBP17.39■□□□□ 0.37
PTPN4-211ENST00000488279 TMEM177Q53S58 311 aa17.39■□□□□ 0.37
PTPN4-211ENST00000488279 Q6ZS49 121 aa17.39■□□□□ 0.37
PTPN4-211ENST00000488279 C5orf30Q96GV9 206 aa17.39■□□□□ 0.37
PTPN4-211ENST00000488279 ELOVL1Q9BW60 279 aa17.39■□□□□ 0.37
PTPN4-211ENST00000488279 SORL1Q92673 2214 aa17.38■□□□□ 0.37
PTPN4-211ENST00000488279 GP9P14770 177 aa17.38■□□□□ 0.37
PTPN4-211ENST00000488279 NR2C2APQ86WQ0 139 aa17.38■□□□□ 0.37
PTPN4-211ENST00000488279 ADTRPQ96IZ2 230 aa17.38■□□□□ 0.37
PTPN4-211ENST00000488279 SRRM4A7MD48 611 aaKnown RBP17.37■□□□□ 0.37
PTPN4-211ENST00000488279 ZP3P21754 424 aa17.37■□□□□ 0.37
PTPN4-211ENST00000488279 DTYMKP23919 212 aa17.37■□□□□ 0.37
PTPN4-211ENST00000488279 CDNFQ49AH0 187 aa17.37■□□□□ 0.37
PTPN4-211ENST00000488279 UBE2UQ5VVX9 321 aa17.37■□□□□ 0.37
PTPN4-211ENST00000488279 H1FOOQ8IZA3 346 aaPredicted RBP17.37■□□□□ 0.37
PTPN4-211ENST00000488279 BRI3O95415 125 aa17.36■□□□□ 0.37
PTPN4-211ENST00000488279 DUTP33316 252 aaKnown RBP17.36■□□□□ 0.37
PTPN4-211ENST00000488279 VMA21Q3ZAQ7 101 aa17.36■□□□□ 0.37
PTPN4-211ENST00000488279 TEX45Q8NA69 505 aa17.36■□□□□ 0.37
PTPN4-211ENST00000488279 ST6GALNAC5Q9BVH7 336 aa17.36■□□□□ 0.37
PTPN4-211ENST00000488279 ELF5Q9UKW6 265 aaPredicted RBP17.36■□□□□ 0.37
PTPN4-211ENST00000488279 IGKV1D-8A0A087WSZ0 117 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 SMIM30A4D0T7 59 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 NOTOA8MTQ0 251 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 CTXN2P0C2S0 81 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 PSMB9P28065 219 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 FGF9P31371 208 aaPredicted RBP17.35■□□□□ 0.37
PTPN4-211ENST00000488279 UBE2KP61086 200 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 HACD4Q5VWC8 232 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 SPARTQ8N0X7 666 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 DDB2Q92466 427 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 PHB2Q99623 299 aa17.35■□□□□ 0.37
PTPN4-211ENST00000488279 TXNL4BQ9NX01 149 aaKnown RBP17.35■□□□□ 0.37
PTPN4-211ENST00000488279 ANKRD34BA5PLL1 514 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 MSGN1A6NI15 193 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 CRYZL1O95825 349 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 AADACP22760 399 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 OVCH2Q7RTZ1 564 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 TPRA1Q86W33 373 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 ANKRD13BQ86YJ7 626 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 SBSPONQ8IVN8 264 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 USMG5Q96IX5 58 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 TINAGL1Q9GZM7 467 aaPredicted RBP17.34■□□□□ 0.37
PTPN4-211ENST00000488279 DCSTAMPQ9H295 470 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 COA4Q9NYJ1 87 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 STUB1Q9UNE7 303 aa17.34■□□□□ 0.37
PTPN4-211ENST00000488279 LINC00473A8K010 186 aa17.33■□□□□ 0.36
PTPN4-211ENST00000488279 J3QRK9 145 aa17.33■□□□□ 0.36
PTPN4-211ENST00000488279 PRSS8Q16651 343 aa17.33■□□□□ 0.36
PTPN4-211ENST00000488279 OSR1Q8TAX0 266 aaPredicted RBP17.33■□□□□ 0.36
PTPN4-211ENST00000488279 FCGR1BQ92637 280 aa17.33■□□□□ 0.36
PTPN4-211ENST00000488279 RSRP1Q9BUV0 290 aa17.33■□□□□ 0.36
PTPN4-211ENST00000488279 TRIM64CA6NLI5 447 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 SCGNO76038 276 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 FRMD6-AS1P0C7T7 363 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 APELAP0DMC3 54 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 KLF5Q13887 457 aaPredicted RBP17.32■□□□□ 0.36
PTPN4-211ENST00000488279 TNXAQ16473 311 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 MRGPRG-AS1Q2M3A8 158 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 ZNF645Q8N7E2 425 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 DCUN1D5Q9BTE7 237 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 Q9H521 79 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 PEF1Q9UBV8 284 aaKnown RBP17.32■□□□□ 0.36
PTPN4-211ENST00000488279 DAPK2Q9UIK4 370 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 SSR3Q9UNL2 185 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 OR2W1Q9Y3N9 320 aa17.32■□□□□ 0.36
PTPN4-211ENST00000488279 SLC22A5O76082 557 aa17.31■□□□□ 0.36
PTPN4-211ENST00000488279 IGLV1-51P01701 117 aa17.31■□□□□ 0.36
PTPN4-211ENST00000488279 ZNF343Q6P1L6 599 aa17.31■□□□□ 0.36
PTPN4-211ENST00000488279 IDO2Q6ZQW0 420 aa17.31■□□□□ 0.36
PTPN4-211ENST00000488279 YTHDF1Q9BYJ9 559 aaKnown RBP17.31■□□□□ 0.36
PTPN4-211ENST00000488279 STAB2Q8WWQ8 2551 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 MPPED1O15442 326 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 ACTL6BO94805 426 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 HLA-DQB1P01920 261 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 NFYAP23511 347 aaPredicted RBP17.3■□□□□ 0.36
PTPN4-211ENST00000488279 TATDN3Q17R31 274 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 CNIH2Q6PI25 160 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 HAPLN4Q86UW8 402 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 OR9G4Q8NGQ1 327 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 SRSF12Q8WXF0 261 aaKnown RBP17.3■□□□□ 0.36
PTPN4-211ENST00000488279 ACOT12Q8WYK0 555 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 PRELID3BQ9Y3B1 194 aa17.3■□□□□ 0.36
PTPN4-211ENST00000488279 RRP15Q9Y3B9 282 aaKnown RBP17.3■□□□□ 0.36
PTPN4-211ENST00000488279 TMEM235A6NFC5 223 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 C3orf84H3BNL1 204 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 CREBL2O60519 120 aaPredicted RBP17.29■□□□□ 0.36
PTPN4-211ENST00000488279 FCGR3BO75015 233 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 TUSC2O75896 110 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 OR9G9P0C7N8 305 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 CD36P16671 472 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 SYNJ2BPP57105 145 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 GNG2P59768 71 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 DYRK1AQ13627 763 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 SFXN4Q6P4A7 337 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 ADAD2Q8NCV1 583 aaKnown RBP17.29■□□□□ 0.36
PTPN4-211ENST00000488279 NUDCD2Q8WVJ2 157 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 RCHY1Q96PM5 261 aa17.29■□□□□ 0.36
PTPN4-211ENST00000488279 HUWE1Q7Z6Z7 4374 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms