RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 RASL11BQ9BPW5 248 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 SRRQ9GZT4 340 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 WNT10AQ9GZT5 417 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
SHROOM1-205ENST00000488072 RRHO14718 337 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 NDUFA3O95167 84 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 PPP5CP53041 499 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 TAS2R19P59542 299 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 MRPS10P82664 201 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 BAK1Q16611 211 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 SCGB2B2Q4G0G5 96 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 IDO2Q6ZQW0 420 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 LHFPL1Q86WI0 220 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 PDPNQ86YL7 162 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 OR51H1Q8NH63 302 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 WIPF2Q8TF74 440 aaPredicted RBP13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 C15orf40Q8WUR7 153 aa13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 FLYWCH2Q96CP2 140 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 METTL1Q9UBP6 276 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-205ENST00000488072 IGHV7-81A0A0B4J1V7 117 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 ANKRD20A5PA0PJZ0 165 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 PGLYRP1O75594 196 aaPredicted RBP13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 IGHG2P01859 326 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 RLN1P04808 185 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 CRYGBP07316 175 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 RPA2P15927 270 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 SSBP2P81877 361 aaPredicted RBP13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 TMEM177Q53S58 311 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 TCTEX1D4Q5JR98 221 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 LCNL1Q6ZST4 164 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 SLC35E3Q7Z769 313 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 Q8N402 240 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 LIN7CQ9NUP9 197 aaKnown RBP13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 WSB1Q9Y6I7 421 aa13.52□□□□□ -0.25
SHROOM1-205ENST00000488072 A0A1B0GUS0 222 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 M0QZK8 103 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 SHOXO15266 292 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 IFNA6P05013 189 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 ETV6P41212 452 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 KLF9Q13886 244 aaPredicted RBP13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 ACTBL2Q562R1 376 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 OR8H1Q8NGG4 311 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 OR13C8Q8NGS7 320 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 HARBI1Q96MB7 349 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 FAM103A1Q9BTL3 118 aaKnown RBP13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 RSRP1Q9BUV0 290 aa13.51□□□□□ -0.25
SHROOM1-205ENST00000488072 LINC00854A0A1B0GVQ3 168 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 G3V318 75 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 ARPC1BO15143 372 aaKnown RBP13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 AKAIN1P0CW23 69 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 MYOD1P15172 320 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 PGAM2P15259 253 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 CX3CL1P78423 397 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 PLGLAQ15195 96 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 RTL8BQ17RB0 113 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 LIN54Q6MZP7 749 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 ZNF66Q6ZN08 573 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 SSX9Q7RTT3 188 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 SPAG16Q8N0X2 631 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 OR51S1Q8NGJ8 323 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 MARCH1Q8TCQ1 289 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 ADTRPQ96IZ2 230 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 CITED1Q99966 193 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 PARP11Q9NR21 331 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 KIAA1456Q9P272 454 aa13.5□□□□□ -0.25
SHROOM1-205ENST00000488072 GPR31O00270 319 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 SLC22A5O76082 557 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 CA2P00918 260 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 CSF1P09603 554 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 EGR2P11161 476 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 SSBP1Q04837 148 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 OR5AU1Q8NGC0 362 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 HSD17B10Q99714 261 aaKnown RBP13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 HRASLSQ9HDD0 168 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 RABL2AQ9UBK7 228 aaPredicted RBP13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 RABL2BQ9UNT1 228 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 PLXNB1O43157 2135 aa13.49□□□□□ -0.25
SHROOM1-205ENST00000488072 TRAV3A0A0B4J244 114 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 S1PR2O95136 353 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 HLA-DRB1P01911 266 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 SAA1P0DJI8 122 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 GNB1P62873 340 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 MSMO1Q15800 293 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 ZNF585BQ52M93 769 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 C18orf65Q6ZTR6 163 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 CENPVQ7Z7K6 275 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 TBC1D26Q86UD7 250 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 STPG2Q8N412 459 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 ARRDC1Q8N5I2 433 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 ZBTB34Q8NCN2 500 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 TERB2Q8NHR7 220 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 CASTOR1Q8WTX7 329 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 TSNAXQ99598 290 aaKnown RBP13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 CITED2Q99967 270 aaPredicted RBP13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 OR51J1Q9H342 316 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 AKIP1Q9NQ31 210 aa13.48□□□□□ -0.25
SHROOM1-205ENST00000488072 MCUBQ9NWR8 336 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms