RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 HLA-DQB1P01920 261 aa15.89■□□□□ 0.13
HDAC4-209ENST00000487617 GNB1P62873 340 aa15.89■□□□□ 0.13
HDAC4-209ENST00000487617 EGFEM1PQ0D2K5 195 aa15.89■□□□□ 0.13
HDAC4-209ENST00000487617 BEST4Q8NFU0 473 aa15.89■□□□□ 0.13
HDAC4-209ENST00000487617 DDB2Q92466 427 aa15.89■□□□□ 0.13
HDAC4-209ENST00000487617 AUNIPQ9H7T9 357 aa15.89■□□□□ 0.13
HDAC4-209ENST00000487617 TRIM64CA6NLI5 447 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 SRRM4A7MD48 611 aaKnown RBP15.88■□□□□ 0.13
HDAC4-209ENST00000487617 LINC00473A8K010 186 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 I3L521 148 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 ARPC1BO15143 372 aaKnown RBP15.88■□□□□ 0.13
HDAC4-209ENST00000487617 SLC22A5O76082 557 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 CRYZL1O95825 349 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 CRYGBP07316 175 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 ARPC4P59998 168 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 RUNX1Q01196 453 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 PJVKQ0ZLH3 352 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 FHL3Q13643 280 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 PYHIN1Q6K0P9 492 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 GVQW1Q8N7I0 195 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 OR1N2Q8NGR9 330 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 TGP01266 2768 aa15.88■□□□□ 0.13
HDAC4-209ENST00000487617 PRKDCP78527 4128 aaKnown RBP15.87■□□□□ 0.13
HDAC4-209ENST00000487617 IGKV1D-13A0A0B4J2D9 117 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 TUSC2O75896 110 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 FCER2P06734 321 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 IGKV1-13P0DP09 117 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 PTHLHP12272 177 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 CD40LGP29965 261 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 VMA21Q3ZAQ7 101 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 UBE2NLQ5JXB2 153 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 HOGA1Q86XE5 327 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 S100A16Q96FQ6 103 aaKnown RBP15.87■□□□□ 0.13
HDAC4-209ENST00000487617 MS4A10Q96PG2 267 aa15.87■□□□□ 0.13
HDAC4-209ENST00000487617 RBMX2Q9Y388 322 aaKnown RBP15.87■□□□□ 0.13
HDAC4-209ENST00000487617 OR8U8P0C7N1 319 aa15.86■□□□□ 0.13
HDAC4-209ENST00000487617 ZNF616Q08AN1 781 aa15.86■□□□□ 0.13
HDAC4-209ENST00000487617 KCTD9Q7L273 389 aa15.86■□□□□ 0.13
HDAC4-209ENST00000487617 SAMD12Q8N8I0 201 aa15.86■□□□□ 0.13
HDAC4-209ENST00000487617 FUNDC2Q9BWH2 189 aa15.86■□□□□ 0.13
HDAC4-209ENST00000487617 PRELID3BQ9Y3B1 194 aa15.86■□□□□ 0.13
HDAC4-209ENST00000487617 WI2-2373I1.2A0A1W2PRP0 233 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 K7EIL1 84 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 XRCC3O43542 346 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 FCGR3BO75015 233 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 IGLV2-14P01704 120 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 CBX5P45973 191 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 TPPP2P59282 170 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 UBE2KP61086 200 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 SSBP2P81877 361 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-209ENST00000487617 C9orf66Q5T8R8 295 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 TEX45Q8NA69 505 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 OSR1Q8TAX0 266 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-209ENST00000487617 DCUN1D5Q9BTE7 237 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 ALX4Q9H161 411 aaPredicted RBP15.85■□□□□ 0.13
HDAC4-209ENST00000487617 ZNF355PQ9NSJ1 428 aa15.85■□□□□ 0.13
HDAC4-209ENST00000487617 SEC14L6B5MCN3 397 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 FCGR2CP31995 323 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 NCS1P62166 190 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 RPL30P62888 115 aaKnown RBP15.84■□□□□ 0.13
HDAC4-209ENST00000487617 OR2B11Q5JQS5 317 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 ASPHD1Q5U4P2 390 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 OR5T1Q8NG75 326 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 SLC25A46Q96AG3 418 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 SLA2Q9H6Q3 261 aa15.84■□□□□ 0.13
HDAC4-209ENST00000487617 ZMAT5Q9UDW3 170 aaKnown RBP15.84■□□□□ 0.13
HDAC4-209ENST00000487617 MRPS7Q9Y2R9 242 aaKnown RBP15.84■□□□□ 0.13
HDAC4-209ENST00000487617 MEIS3P1A6NDR6 274 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 IGHV3-11P01762 117 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 TRGV3P03979 118 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 LGALS1P09382 135 aaKnown RBP15.83■□□□□ 0.12
HDAC4-209ENST00000487617 AADACP22760 399 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 VBP1P61758 197 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 TMEM69Q5SWH9 247 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 IDO2Q6ZQW0 420 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 OR13F1Q8NGS4 319 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 TCTEX1D2Q8WW35 142 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 HSD17B10Q99714 261 aaKnown RBP15.83■□□□□ 0.12
HDAC4-209ENST00000487617 IFT46Q9NQC8 304 aa15.83■□□□□ 0.12
HDAC4-209ENST00000487617 TAS2R20P59543 309 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 DGCR2P98153 550 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 TNXAQ16473 311 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 PRSS8Q16651 343 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 MRGPRG-AS1Q2M3A8 158 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 DEFB121Q5J5C9 76 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 OVCH2Q7RTZ1 564 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 POC5Q8NA72 575 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 SECTM1Q8WVN6 248 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 SNAPC3Q92966 411 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 KCTD12Q96CX2 325 aaKnown RBP15.82■□□□□ 0.12
HDAC4-209ENST00000487617 TMEM68Q96MH6 324 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 PHB2Q99623 299 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 TAS2R8Q9NYW2 309 aa15.82■□□□□ 0.12
HDAC4-209ENST00000487617 LINC01619G3V211 115 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 H3BUA1 57 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 SAA1P0DJI8 122 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-209ENST00000487617 EIF4EBP1Q13541 118 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-209ENST00000487617 MFSD4AQ8N468 514 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 OR5AP2Q8NGF4 316 aa15.81■□□□□ 0.12
HDAC4-209ENST00000487617 ACOT12Q8WYK0 555 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms