RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 AGR3Q8TD06 166 aa-0.5□□□□□ -2.49
RBM39-234ENST00000487604 PLAC8Q9NZF1 115 aa-0.5□□□□□ -2.49
RBM39-234ENST00000487604 ZFP30Q9Y2G7 519 aa-0.5□□□□□ -2.49
RBM39-234ENST00000487604 LHFPL6Q9Y693 200 aa-0.5□□□□□ -2.49
RBM39-234ENST00000487604 TTC41PQ6P2S7 1318 aa-0.5□□□□□ -2.49
RBM39-234ENST00000487604 GSTTP1A0A1W2PQM5 241 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 COCHO43405 550 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 PPBPP02775 128 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 RPL28P46779 137 aaKnown RBP-0.51□□□□□ -2.49
RBM39-234ENST00000487604 CDK9P50750 372 aaKnown RBP-0.51□□□□□ -2.49
RBM39-234ENST00000487604 VSNL1P62760 191 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 HERVK_113P63121 156 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 PTPRSQ13332 1948 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 OR2Y1Q8NGV0 311 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 NMNAT3Q96T66 252 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 EIF5A2Q9GZV4 153 aaKnown RBP-0.51□□□□□ -2.49
RBM39-234ENST00000487604 CLEC2DQ9UHP7 191 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 SNX24Q9Y343 169 aa-0.51□□□□□ -2.49
RBM39-234ENST00000487604 SYNRGQ9UMZ2 1314 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 A0A087WUU8 490 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 H3BT86 120 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 ITGB1BP1O14713 200 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 MRASO14807 208 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 MPZL2O60487 215 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 ALDH3A1P30838 453 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 OR10A3P58181 314 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 HIST1H4AP62805 103 aaKnown RBP-0.52□□□□□ -2.49
RBM39-234ENST00000487604 RUNX1Q01196 453 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 OR13C8Q8NGS7 320 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 ASB13Q8WXK3 278 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 CATSPER2Q96P56 530 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 SERPINI1Q99574 410 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 PSME2Q9UL46 239 aa-0.52□□□□□ -2.49
RBM39-234ENST00000487604 HRNRQ86YZ3 2850 aaPredicted RBP-0.52□□□□□ -2.49
RBM39-234ENST00000487604 KIF27Q86VH2 1401 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 TMEM212A6NML5 194 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 H0YIV9 168 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 TRAPPC2LH3BP13 241 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 UBBP0CG47 229 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 RAB14P61106 215 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 BTN3A2P78410 334 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 C1DQ13901 141 aaKnown RBP-0.53□□□□□ -2.49
RBM39-234ENST00000487604 STK38Q15208 465 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 BSXQ3C1V8 233 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 ACSM3Q53FZ2 586 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 OR10J3Q5JRS4 329 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 C1orf174Q8IYL3 243 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 LRRC34Q8IZ02 419 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 NATD1Q8N6N6 113 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 AQP3Q92482 292 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 CPNE2Q96FN4 548 aaPredicted RBP-0.53□□□□□ -2.49
RBM39-234ENST00000487604 CHST6Q9GZX3 395 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 UBQLN4Q9NRR5 601 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 SIPA1L1O43166 1804 aa-0.53□□□□□ -2.49
RBM39-234ENST00000487604 NCOR2Q9Y618 2525 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 PTPRZ1P23471 2315 aaPredicted RBP-0.54□□□□□ -2.5
RBM39-234ENST00000487604 A0A1W2PPM0 123 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 CREBL2O60519 120 aaPredicted RBP-0.54□□□□□ -2.5
RBM39-234ENST00000487604 STAG3L2P0CL84 134 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 FXYD7P58549 80 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 MESTQ5EB52 335 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 ATP5L2Q7Z4Y8 100 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 MRPL52Q86TS9 123 aaKnown RBP-0.54□□□□□ -2.5
RBM39-234ENST00000487604 BAP18Q8IXM2 172 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 PDCL2Q8N4E4 241 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 OR8B3Q8NGG8 313 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 IFT81Q8WYA0 676 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 PPWD1Q96BP3 646 aaKnown RBP-0.54□□□□□ -2.5
RBM39-234ENST00000487604 COMMD9Q9P000 198 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 MUC2Q02817 5179 aa-0.54□□□□□ -2.5
RBM39-234ENST00000487604 LRP1Q07954 4544 aaKnown RBP-0.54□□□□□ -2.5
RBM39-234ENST00000487604 ABCC12Q96J65 1359 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 GREB1Q4ZG55 1949 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 GOLGA6L10A6NI86 522 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 TBPL1P62380 186 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 FAM27BQ5VT28 67 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 C17orf78Q8N4C9 275 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 RPP25LQ8N5L8 163 aaKnown RBP-0.55□□□□□ -2.5
RBM39-234ENST00000487604 CDRT4Q8N9R6 151 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 TESCQ96BS2 214 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 AMELYQ99218 206 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 OR5AC2Q9NZP5 309 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 CHD2O14647 1828 aaKnown RBP-0.55□□□□□ -2.5
RBM39-234ENST00000487604 NPATQ14207 1427 aa-0.55□□□□□ -2.5
RBM39-234ENST00000487604 KIF24Q5T7B8 1368 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 SNRNP200O75643 2136 aaKnown RBP-0.56□□□□□ -2.5
RBM39-234ENST00000487604 TRAV14DV4A0A0A6YYC5 116 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 GOLGA6L7A0A1B0GV03 622 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 A0A1B0GX12 115 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 UBE2KP61086 200 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 AP1S1P61966 158 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 VAMP3Q15836 100 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 XKRXQ6PP77 449 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 AHSA2Q719I0 299 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 LCA10Q71F78 164 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 ZNF321PQ8N8H1 164 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 OR7D2Q96RA2 312 aa-0.56□□□□□ -2.5
RBM39-234ENST00000487604 NXT1Q9UKK6 140 aaKnown RBP-0.56□□□□□ -2.5
RBM39-234ENST00000487604 DICER1Q9UPY3 1922 aaKnown RBP-0.56□□□□□ -2.5
RBM39-234ENST00000487604 STRCQ7RTU9 1775 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms