RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 SCAF11Q99590 1463 aaKnown RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 A0A0J9YW62 118 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 H3BT86 120 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 SGCEO43556 437 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 LDOC1O95751 146 aaPredicted RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 CST4P01036 141 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 HBZP02008 142 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 RNASE3P12724 160 aaKnown RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 PSMB8P28062 276 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 CRATP43155 626 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 REG1BP48304 166 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 FXYD7P58549 80 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 TAS2R20P59543 309 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 TBPL1P62380 186 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 LCN8Q6JVE9 175 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 SCGB1D4Q6XE38 83 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 BAP18Q8IXM2 172 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 UMODL1-AS1Q8N2C9 162 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 NATD1Q8N6N6 113 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 NMNAT3Q96T66 252 aa-0.01□□□□□ -2.41
SENP6-210ENST00000487548 MRPL57Q9BQC6 102 aaKnown RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 EIF5A2Q9GZV4 153 aaKnown RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 RABL2AQ9UBK7 228 aaPredicted RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 MRM2Q9UI43 246 aaKnown RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 SYNE2Q8WXH0 6885 aaKnown RBP-0.01□□□□□ -2.41
SENP6-210ENST00000487548 SETD5Q9C0A6 1442 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 KIAA0232Q92628 1395 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 ABCC12Q96J65 1359 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 TRAV38-1A0A0B4J264 116 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 MEIS3P1A6NDR6 274 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 OR51F1A6NGY5 319 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 F5H5K5 113 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 M0R381 172 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 TRGC1P0CF51 173 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 RPL28P46779 137 aaKnown RBP-0.02□□□□□ -2.41
SENP6-210ENST00000487548 SNAP25P60880 206 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 BTN3A2P78410 334 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 TMEM249Q2WGJ8 235 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 ACSM3Q53FZ2 586 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 SPATA8Q6RVD6 105 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 ST13P4Q8IZP2 240 aaPredicted RBP-0.02□□□□□ -2.41
SENP6-210ENST00000487548 TMEM86AQ8N2M4 240 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 ZNF565Q8N9K5 539 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 RORBQ92753 470 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 PPWD1Q96BP3 646 aaKnown RBP-0.02□□□□□ -2.41
SENP6-210ENST00000487548 SMR3AQ99954 134 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 SPRR2GQ9BYE4 73 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 CHST6Q9GZX3 395 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 EMC3Q9P0I2 261 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 LHFPL6Q9Y693 200 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 NAV1Q8NEY1 1877 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 SMARCA4P51532 1647 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 MAST4O15021 2626 aa-0.02□□□□□ -2.41
SENP6-210ENST00000487548 CPAMD8Q8IZJ3 1885 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 TONSLQ96HA7 1378 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 TRAV8-1A0A0A6YYK1 113 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 OR6C6A6NF89 314 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 MPZL2O60487 215 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 CREBL2O60519 120 aaPredicted RBP-0.03□□□□□ -2.41
SENP6-210ENST00000487548 TFPTP0C1Z6 253 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 RAB8AP61006 207 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 RAB14P61106 215 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 HIST1H4AP62805 103 aaKnown RBP-0.03□□□□□ -2.41
SENP6-210ENST00000487548 TNNC1P63316 161 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 EXOC3L4Q17RC7 722 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 RPP25LQ8N5L8 163 aaKnown RBP-0.03□□□□□ -2.41
SENP6-210ENST00000487548 Q8N6K4 173 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 TLCD1Q96CP7 247 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 MS4A6EQ96DS6 147 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 OBSCN-AS1Q96MR7 158 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 HEATR5BQ9P2D3 2071 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 FAT4Q6V0I7 4981 aa-0.03□□□□□ -2.41
SENP6-210ENST00000487548 LAMA4Q16363 1823 aa-0.03□□□□□ -2.42
SENP6-210ENST00000487548 FLT4P35916 1363 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 C9JCJ5 164 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 TRAPPC2LH3BP13 241 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 COPEO14579 308 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 LIN7AO14910 233 aaPredicted RBP-0.04□□□□□ -2.42
SENP6-210ENST00000487548 SYNGR1O43759 233 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 PPBPP02775 128 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 UBBP0CG47 229 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 SLC35E2BP0CK96 405 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 CCL2P13500 99 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 CCL5P13501 91 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 ALDH3A1P30838 453 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 DLX6P56179 175 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 TMEM33P57088 247 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 TEX36Q5VZQ5 186 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 GPHB5Q86YW7 130 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 SLC22A24Q8N4F4 322 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 C12orf29Q8N999 325 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 OR8B3Q8NGG8 313 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 LRRC20Q8TCA0 184 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 Q8WTZ3 238 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 TESCQ96BS2 214 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 TRABDQ9H4I3 376 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 NAT8Q9UHE5 227 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 POFUT2Q9Y2G5 429 aa-0.04□□□□□ -2.42
SENP6-210ENST00000487548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP-0.04□□□□□ -2.42
SENP6-210ENST00000487548 GLI3P10071 1580 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms