RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 XRCC3O43542 346 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 SOX15O60248 233 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 HPGDSO60760 199 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 RBBP9O75884 186 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 TUSC2O75896 110 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 IGHG4P01861 327 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 HLA-DQB1P01920 261 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 APOA2P02652 100 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 PRB2P02812 416 aaPredicted RBP5.59□□□□□ -1.51
UBE4B-209ENST00000487244 AADACP22760 399 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 DUTP33316 252 aaKnown RBP5.59□□□□□ -1.51
UBE4B-209ENST00000487244 RPS16P62249 146 aaKnown RBP5.59□□□□□ -1.51
UBE4B-209ENST00000487244 RPL30P62888 115 aaKnown RBP5.59□□□□□ -1.51
UBE4B-209ENST00000487244 SLC35B1P78383 322 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 CX3CL1P78423 397 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 SPCS2Q15005 226 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 PLGLAQ15195 96 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 ECSCRQ19T08 205 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 MRGPRG-AS1Q2M3A8 158 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 BEAN1Q3B7T3 259 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 C19orf54Q5BKX5 351 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 OR2B11Q5JQS5 317 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 TMEM69Q5SWH9 247 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 TEX38Q6PEX7 206 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 CNIH2Q6PI25 160 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 HOGA1Q86XE5 327 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 PDPNQ86YL7 162 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 BVESQ8NE79 360 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 KLHL30-AS1Q8NEE0 82 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 ANAPC16Q96DE5 110 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 HARBI1Q96MB7 349 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 FAM103A1Q9BTL3 118 aaKnown RBP5.59□□□□□ -1.51
UBE4B-209ENST00000487244 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 DIABLOQ9NR28 239 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 KIAA1456Q9P272 454 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 METTL1Q9UBP6 276 aaKnown RBP5.59□□□□□ -1.51
UBE4B-209ENST00000487244 OR2W1Q9Y3N9 320 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 A3GALT2U3KPV4 340 aa5.59□□□□□ -1.51
UBE4B-209ENST00000487244 TRAV41A0A0B4J266 112 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 NUDT19A8MXV4 375 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ARPC1BO15143 372 aaKnown RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 TMEM127O75204 238 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 CRYZL1O95825 349 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 CA2P00918 260 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 CRYGBP07316 175 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 OR5H8P0DN80 308 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 IGLL1P15814 213 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ELK1P19419 428 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 VDAC1P21796 283 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 PSMB8P28062 276 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 PPIFP30405 207 aaKnown RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 FCGR2CP31995 323 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 THBS3P49746 956 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 LUMP51884 338 aaPredicted RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 BRWD1-AS2P59051 145 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ARPC4P59998 168 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 FOXE3Q13461 319 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 EIF4EBP1Q13541 118 aaPredicted RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 KIAA0141Q14154 515 aaPredicted RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 IDO2Q6ZQW0 420 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 GPR141Q7Z602 305 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF695Q8IW36 515 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 COMMD1Q8N668 190 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF645Q8N7E2 425 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 LINC00482Q8N8I6 264 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 RNF152Q8N8N0 203 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 MINDY2Q8NBR6 621 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 GRPEL2Q8TAA5 225 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 MYOZ3Q8TDC0 251 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ABHD5Q8WTS1 349 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 SECTM1Q8WVN6 248 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 FLYWCH2Q96CP2 140 aaKnown RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 S100A16Q96FQ6 103 aaKnown RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 RAX2Q96IS3 184 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 GNB4Q9HAV0 340 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 IFT46Q9NQC8 304 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 ANAPC10Q9UM13 185 aa5.58□□□□□ -1.52
UBE4B-209ENST00000487244 RBMX2Q9Y388 322 aaKnown RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 PRKDCP78527 4128 aaKnown RBP5.58□□□□□ -1.52
UBE4B-209ENST00000487244 A0A1W2PN81 502 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 TNFSF12O43508 249 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 FCGR3BO75015 233 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 SPDEFO95238 335 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 PPYP01298 95 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 APOA1P02647 267 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 PMP2P02689 132 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 ELANEP08246 267 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CTXN2P0C2S0 81 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 ATF4P18848 351 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CHRNA7P36544 502 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 RFX2P48378 723 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 RORCP51449 518 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CRIP2P52943 208 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 FXYD4P59646 89 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 GNB1P62873 340 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 DEFA5Q01523 94 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CDK10Q15131 360 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 RTL8BQ17RB0 113 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 TMEM177Q53S58 311 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms