RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 IGHV3-48P01763 117 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 DLK1P80370 383 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 TIMM23BQ5SRD1 257 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 SPSB4Q96A44 273 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 SAMD10Q9BYL1 202 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 IGHV1-18A0A0C4DH31 117 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 IQCF6A8MYZ5 107 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 GLRXP35754 106 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 WDR82Q6UXN9 313 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 ZBTB34Q8NCN2 500 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 METRNQ9UJH8 293 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
HMGN1-216ENST00000486741 TNFRSF9Q07011 255 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 TMEM41BQ5BJD5 291 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 RPEQ96AT9 228 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 ZDHHC11Q9H8X9 412 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
HMGN1-216ENST00000486741 TRBV6-7A0A0A0MS04 114 aa11.15□□□□□ -0.63
HMGN1-216ENST00000486741 DVL1O14640 695 aa11.15□□□□□ -0.63
HMGN1-216ENST00000486741 RAMP3O60896 148 aa11.15□□□□□ -0.63
HMGN1-216ENST00000486741 RNF224P0DH78 156 aa11.15□□□□□ -0.63
HMGN1-216ENST00000486741 PRR27Q6MZM9 219 aa11.15□□□□□ -0.63
HMGN1-216ENST00000486741 GFRA3O60609 400 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 DANCRP0C864 163 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 ACSM6Q6P461 480 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 MS4A5Q9H3V2 200 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 A0A1B0GV90 55 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 GATCO43716 136 aaKnown RBP11.14□□□□□ -0.63
HMGN1-216ENST00000486741 CD40P25942 277 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF383Q8NA42 475 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 RNF138Q8WVD3 245 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 RPRMQ9NS64 109 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 J3QR06 171 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 FAM53AQ6NSI3 398 aaPredicted RBP11.14□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF880Q6PDB4 577 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 TMEM37Q8WXS4 190 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 TUBD1Q9UJT1 453 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 PIEZO1Q92508 2521 aa11.14□□□□□ -0.63
HMGN1-216ENST00000486741 NCBP2LA6PVI3 153 aaKnown RBP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 RAB29O14966 203 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 WISP2O76076 250 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 MMP9P14780 707 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 CFPP27918 469 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 RPL29P47914 159 aaKnown RBP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 RND3P61587 244 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 TMEM241Q24JQ0 296 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 FAM78BQ5VT40 261 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 WFDC1Q9HC57 220 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 CISD1Q9NZ45 108 aaKnown RBP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 YLPM1P49750 1951 aaKnown RBP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 NPY1RP25929 384 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 VMA21Q3ZAQ7 101 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 TGIF2LYQ8IUE0 185 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 TGIF2LXQ8IUE1 241 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 C18orf12Q96KH6 178 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 SFXN3Q9BWM7 321 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 PTPRQQ9UMZ3 2332 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF25P17030 456 aaPredicted RBP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 SLC35E4Q6ICL7 350 aa11.13□□□□□ -0.63
HMGN1-216ENST00000486741 TAF15Q92804 592 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 ANKHD1Q8IWZ3 2542 aaKnown RBP11.13□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF320A2RRD8 509 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 F6UZH7 168 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 HPRT1P00492 218 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 CD55P08174 381 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 TMEM11P17152 192 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 TNXAQ16473 311 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 DNM1P46Q6ZS02 220 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 HES4Q9HCC6 221 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 AP4M1O00189 453 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 COX7A2P2O60397 106 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 NAPSAO96009 420 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 CD1BP29016 333 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF90Q03938 601 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 OR10A7Q8NGE5 316 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 CORO2AQ92828 525 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 MRPL37Q9BZE1 423 aaKnown RBP11.12□□□□□ -0.63
HMGN1-216ENST00000486741 LPAR2Q9HBW0 351 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 CYTL1Q9NRR1 136 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 MALRD1Q5VYJ5 2156 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 J3QW42 95 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 ORM2P19652 201 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 HERPUD1Q15011 391 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 ATP6V1FQ16864 119 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 QTRT1Q9BXR0 403 aaKnown RBP11.12□□□□□ -0.63
HMGN1-216ENST00000486741 TMEM140Q9NV12 185 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 DBX1A6NMT0 343 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 C11orf94C9JXX5 98 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 K7N7A8 449 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 FLYWCH2Q96CP2 140 aaKnown RBP11.12□□□□□ -0.63
HMGN1-216ENST00000486741 DAZAP1Q96EP5 407 aaKnown RBP11.12□□□□□ -0.63
HMGN1-216ENST00000486741 TXN2Q99757 166 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 KIAA1456Q9P272 454 aa11.12□□□□□ -0.63
HMGN1-216ENST00000486741 CLDN34H7C241 214 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 GNB2P62879 340 aa11.11□□□□□ -0.63
HMGN1-216ENST00000486741 ZNF324BQ6AW86 544 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms