RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SLC35D1Q9NTN3 355 aa10.24□□□□□ -0.77
HDAC6-229ENST00000486665 MGAM2Q2M2H8 2515 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 TEX13DA0A0J9YY54 714 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-229ENST00000486665 H3BUX3 64 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 RAMP3O60896 148 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 IGKV1D-33P01593 117 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 IGKV1-33P01594 117 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 IGKV1-16P04430 117 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 S100GP29377 79 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 BRS3P32247 399 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 MC5RP33032 325 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 IER3P46695 156 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 HNF4GQ14541 408 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 ZNF585BQ52M93 769 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 PLET1Q6UQ28 207 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 THNSL2Q86YJ6 484 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-229ENST00000486665 TP53RKQ96S44 253 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 PRR13Q9NZ81 148 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 WASHC3Q9Y3C0 194 aa10.23□□□□□ -0.77
HDAC6-229ENST00000486665 C3orf85A0A1B0GTC6 90 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 INMT-MINDY4F8WBC2 141 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 H7C2Y5 167 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-229ENST00000486665 APOA2P02652 100 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 OR5AC1P0C628 307 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 OR4E1P0C645 316 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 MECP2P51608 486 aaKnown RBP10.22□□□□□ -0.77
HDAC6-229ENST00000486665 CATR1Q13166 79 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 PPP1R1AQ13522 171 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 EBI3Q14213 229 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 OXA1LQ15070 435 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 SLC9A3R2Q15599 337 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 LY6EQ16553 131 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 AANATQ16613 207 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 SGPP2Q8IWX5 399 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 Q8N6K4 173 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 MARVELD1Q9BSK0 173 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 ALX4Q9H161 411 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-229ENST00000486665 TNFRSF19Q9NS68 423 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 PRELID3BQ9Y3B1 194 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 TRRAPQ9Y4A5 3859 aa10.22□□□□□ -0.77
HDAC6-229ENST00000486665 A6NDX4 124 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 SRRM4A7MD48 611 aaKnown RBP10.21□□□□□ -0.77
HDAC6-229ENST00000486665 H0Y980 276 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 PEX14O75381 377 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 SFT2D2O95562 160 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 CRYZL1O95825 349 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 MOSP00540 346 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 IGKV1-39P01597 117 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 IGKV1D-39P04432 117 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 FAM106CPP0CH98 169 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 RRASP10301 218 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 CNTFRP26992 372 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 LPAR6P43657 344 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 ARHGDIBP52566 201 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 TAS2R31P59538 309 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 TAGLNQ01995 201 aaKnown RBP10.21□□□□□ -0.77
HDAC6-229ENST00000486665 HES1Q14469 280 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 TMEM187Q14656 261 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 TMEM128Q5BJH2 165 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 PDPNQ86YL7 162 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 OR52B4Q8NGK2 314 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 OR2T10Q8NGZ9 312 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 GLYATL2Q8WU03 294 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 SEC22CQ9BRL7 303 aa10.21□□□□□ -0.77
HDAC6-229ENST00000486665 LIN7CQ9NUP9 197 aaKnown RBP10.21□□□□□ -0.77
HDAC6-229ENST00000486665 C9orf170A2RU37 121 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDAC6-229ENST00000486665 S1PR2O95136 353 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 IL5P05113 134 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM11P17152 192 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 VAMP1P23763 118 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 UCP1P25874 307 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 KIR2DS2P43631 304 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 F2RL1P55085 397 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 UBE2MP61081 183 aaKnown RBP10.2□□□□□ -0.78
HDAC6-229ENST00000486665 RPS16P62249 146 aaKnown RBP10.2□□□□□ -0.78
HDAC6-229ENST00000486665 SCGB2A2Q13296 93 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 RTL8BQ17RB0 113 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 ANKRD55Q3KP44 614 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM177Q53S58 311 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 C12orf54Q6X4T0 127 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 TMEM219Q86XT9 240 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 TCTEX1D1Q8N7M0 179 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 OR4S2Q8NH73 311 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 LHFPL5Q8TAF8 219 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 CHPT1Q8WUD6 406 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 FLYWCH2Q96CP2 140 aaKnown RBP10.2□□□□□ -0.78
HDAC6-229ENST00000486665 GALNT14Q96FL9 552 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 DUX5Q96PT3 197 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 ESM1Q9NQ30 184 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 PLSCR3Q9NRY6 295 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 KCNIP3Q9Y2W7 256 aa10.2□□□□□ -0.78
HDAC6-229ENST00000486665 CMYA5Q8N3K9 4069 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 HPRT1P00492 218 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 IGLV2-23P01705 113 aa10.19□□□□□ -0.78
HDAC6-229ENST00000486665 RPA2P15927 270 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms