RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PATE4P0C8F1 98 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 OR13C7P0DN81 318 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 S100A2P29034 98 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 NPBWR2P48146 333 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 DSCR9P59020 149 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 TBC1D28Q2M2D7 210 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SAMD5Q5TGI4 173 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 VHLLQ6RSH7 139 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 ZNF429Q86V71 674 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 MRPL30Q8TCC3 161 aaKnown RBP7.54□□□□□ -1.2
COL12A1-208ENST00000486533 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 OR5P3Q8WZ94 311 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 FAM168AQ92567 244 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 SCRT1Q9BWW7 348 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 YAE1D1Q9NRH1 226 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
COL12A1-208ENST00000486533 MXRA5Q9NR99 2828 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 SVEP1Q4LDE5 3571 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 ELOA3CA0A087WX78 387 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 TMEM210A6NLX4 147 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 KIAA1324LA8MWY0 1029 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 H3BQ15 152 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CHST1O43916 411 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 PGLYRP1O75594 196 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 LY6HO94772 140 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 MBP02144 154 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CD33P20138 364 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 PPP1CCP36873 323 aaKnown RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 IDH3GP51553 393 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 EFNA4P52798 201 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 FABP9Q0Z7S8 132 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CATR1Q13166 79 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 ATP6V1FQ16864 119 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 RBMS3Q6XE24 437 aaKnown RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 C1orf87Q8N0U7 546 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 LILRB2Q8N423 598 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CPEB3Q8NE35 698 aaKnown RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 BSCL2Q96G97 398 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 POM121L2Q96KW2 1035 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CTDSP1Q9GZU7 261 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 PARP12Q9H0J9 701 aaKnown RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 SEBOXQ9HB31 216 aaPredicted RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CCL28Q9NRJ3 127 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 TMEM242Q9NWH2 141 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 KCNIP1Q9NZI2 227 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 RBM7Q9Y580 266 aaKnown RBP7.53□□□□□ -1.2
COL12A1-208ENST00000486533 CUBNO60494 3623 aa7.53□□□□□ -1.2
COL12A1-208ENST00000486533 LOC102723971A0A1B0GUV8 181 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 TXNL1O43396 289 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 SYNGR2O43760 224 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 CD5LO43866 347 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 IGKV3-15P01624 115 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 CELA3BP08861 270 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 SCTP09683 121 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 OR4A8P0C604 315 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 SLC25A16P16260 332 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 TUBG1P23258 451 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 OMGP23515 440 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 RPS23P62266 143 aaKnown RBP7.52□□□□□ -1.21
COL12A1-208ENST00000486533 PMS2P11Q13670 270 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 HEPN1Q6WQI6 88 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 FGFBP3Q8TAT2 258 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 BTF3L4Q96K17 158 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 TUBG2Q9NRH3 451 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 RTTNQ86VV8 2226 aa7.52□□□□□ -1.21
COL12A1-208ENST00000486533 FBN1P35555 2871 aaKnown RBP7.52□□□□□ -1.21
COL12A1-208ENST00000486533 ZNF503-AS2A6NEH8 195 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 SH2D1BO14796 132 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 IGLV1-44P01699 117 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 IGHV2-5P01817 119 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 FABP1P07148 127 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 ACAA1P09110 424 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-208ENST00000486533 BCL2P10415 239 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 RAC2P15153 192 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 CBR1P16152 277 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
COL12A1-208ENST00000486533 MZT1Q08AG7 82 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 KIAA0141Q14154 515 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-208ENST00000486533 ADIPOQQ15848 244 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 TMEM249Q2WGJ8 235 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 C3orf36Q3SXR2 165 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 CXorf66Q5JRM2 361 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-208ENST00000486533 DNLZQ5SXM8 178 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 TRAT1Q6PIZ9 186 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 SPSB3Q6PJ21 355 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 MDP1Q86V88 176 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 MYPOPQ86VE0 399 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-208ENST00000486533 FAM24BQ8N5W8 94 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 FAM169BQ8N8A8 192 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 CLDND2Q8NHS1 167 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 C10orf105Q8TEF2 133 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 MBD3L1Q8WWY6 194 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 RAB39BQ96DA2 213 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 CIB3Q96Q77 187 aaPredicted RBP7.51□□□□□ -1.21
COL12A1-208ENST00000486533 C20orf24Q9BUV8 137 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 MAGT1Q9H0U3 335 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 OR51M1Q9H341 326 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 CDH20Q9HBT6 801 aa7.51□□□□□ -1.21
COL12A1-208ENST00000486533 PSENENQ9NZ42 101 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms