RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 CREBL2O60519 120 aaPredicted RBP10.04□□□□□ -0.8
CHMP3-208ENST00000486404 TUSC2O75896 110 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 SLC22A5O76082 557 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 CRYZL1O95825 349 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 DUTP33316 252 aaKnown RBP10.04□□□□□ -0.8
CHMP3-208ENST00000486404 TGFBR1P36897 503 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 RAB9AP51151 201 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 TPPP2P59282 170 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 ZNF616Q08AN1 781 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 TMEM177Q53S58 311 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 ZNF562Q6V9R5 426 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 ZNF491Q8N8L2 437 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 LFNGQ8NES3 379 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 BEST4Q8NFU0 473 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 CASTOR1Q8WTX7 329 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 YIPF6Q96EC8 236 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 PHB2Q99623 299 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 DCUN1D5Q9BTE7 237 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 IFT46Q9NQC8 304 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 ZNF355PQ9NSJ1 428 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 PRELID3BQ9Y3B1 194 aa10.04□□□□□ -0.8
CHMP3-208ENST00000486404 SEC14L6B5MCN3 397 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 CBX5P45973 191 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 FHL3Q13643 280 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 AKIRIN2Q53H80 203 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 C19orf54Q5BKX5 351 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 OR2B11Q5JQS5 317 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 TMEM69Q5SWH9 247 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 C9orf66Q5T8R8 295 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 SAMD12Q8N8I0 201 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 OR1N2Q8NGR9 330 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 TCTEX1D2Q8WW35 142 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 S100A16Q96FQ6 103 aaKnown RBP10.03□□□□□ -0.8
CHMP3-208ENST00000486404 AUNIPQ9H7T9 357 aa10.03□□□□□ -0.8
CHMP3-208ENST00000486404 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
CHMP3-208ENST00000486404 LINC00473A8K010 186 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 MPPED1O15442 326 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 SOX15O60248 233 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 FCGR3BO75015 233 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 IGLV2-23P01705 113 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 HLA-DQB1P01920 261 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 TRGV3P03979 118 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 FCER2P06734 321 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 LGALS1P09382 135 aaKnown RBP10.02□□□□□ -0.81
CHMP3-208ENST00000486404 UBE2KP61086 200 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 DGCR2P98153 550 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 RUNX1Q01196 453 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 EGFEM1PQ0D2K5 195 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 DCTN2Q13561 401 aaKnown RBP10.02□□□□□ -0.81
CHMP3-208ENST00000486404 TNXAQ16473 311 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 OR13F1Q8NGS4 319 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 OR4S2Q8NH73 311 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 OSR1Q8TAX0 266 aaPredicted RBP10.02□□□□□ -0.81
CHMP3-208ENST00000486404 SECTM1Q8WVN6 248 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 ACOT12Q8WYK0 555 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 MS4A10Q96PG2 267 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 HSD17B10Q99714 261 aaKnown RBP10.02□□□□□ -0.81
CHMP3-208ENST00000486404 SLA2Q9H6Q3 261 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 NUBP2Q9Y5Y2 271 aa10.02□□□□□ -0.81
CHMP3-208ENST00000486404 IGKV1D-13A0A0B4J2D9 117 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 MEIS3P1A6NDR6 274 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 I3L521 148 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 ARPC1BO15143 372 aaKnown RBP10.01□□□□□ -0.81
CHMP3-208ENST00000486404 ACTL6BO94805 426 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 IGHV3-11P01762 117 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 IGKV1-13P0DP09 117 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 EGR2P11161 476 aaPredicted RBP10.01□□□□□ -0.81
CHMP3-208ENST00000486404 FCGR2CP31995 323 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 RPS19P39019 145 aaKnown RBP10.01□□□□□ -0.81
CHMP3-208ENST00000486404 KRTAP10-11P60412 298 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 IDO2Q6ZQW0 420 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 HOGA1Q86XE5 327 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 GVQW1Q8N7I0 195 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 POC5Q8NA72 575 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 DDB2Q92466 427 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 SLC25A46Q96AG3 418 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 FUNDC2Q9BWH2 189 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 ALX4Q9H161 411 aaPredicted RBP10.01□□□□□ -0.81
CHMP3-208ENST00000486404 COA4Q9NYJ1 87 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 TAS2R8Q9NYW2 309 aa10.01□□□□□ -0.81
CHMP3-208ENST00000486404 C13orf42A0A1B0GVH6 325 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 LINC01619G3V211 115 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 H3BUA1 57 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 K7EIL1 84 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 XRCC3O43542 346 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 PTHLHP12272 177 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 AADACP22760 399 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 TAS2R20P59543 309 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 FXYD4P59646 89 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 HERV-K104P61576 105 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 NCS1P62166 190 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 PJVKQ0ZLH3 352 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 KIAA0141Q14154 515 aaPredicted RBP10□□□□□ -0.81
CHMP3-208ENST00000486404 DEFB121Q5J5C9 76 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 OVCH2Q7RTZ1 564 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 TMEM17Q86X19 198 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 TEX45Q8NA69 505 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 OR5T1Q8NG75 326 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 TMEM68Q96MH6 324 aa10□□□□□ -0.81
CHMP3-208ENST00000486404 WI2-2373I1.2A0A1W2PRP0 233 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms