RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TMEM222Q9H0R3 208 aa9.22□□□□□ -0.93
SND1-212ENST00000485871 OR2D2Q9H210 308 aa9.22□□□□□ -0.93
SND1-212ENST00000485871 ONECUT1Q9UBC0 465 aa9.22□□□□□ -0.93
SND1-212ENST00000485871 TMEM56-RWDD3S4R434 201 aa9.22□□□□□ -0.93
SND1-212ENST00000485871 WNK2Q9Y3S1 2297 aa9.22□□□□□ -0.93
SND1-212ENST00000485871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.932e-7■■■□□ 15.8
SND1-212ENST00000485871 IGHV2-26A0A0B4J1V2 119 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 A0A1W2PPE3 182 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 E5RGE8 158 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 H0Y980 276 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 J3QR06 171 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 HSD17B6O14756 317 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 DEDDO75618 318 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 SPDEFO95238 335 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 IGHV4-31P0DP07 118 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 GNG10P50151 68 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 ZNF137PP52743 207 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 DVL1P1P54792 670 aaPredicted RBP9.21□□□□□ -0.94
SND1-212ENST00000485871 PRB3Q04118 309 aaPredicted RBP9.21□□□□□ -0.94
SND1-212ENST00000485871 RAB32Q13637 225 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 PHLDA2Q53GA4 152 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 FAM71E2Q8N5Q1 922 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 ZNF645Q8N7E2 425 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 ZBTB34Q8NCN2 500 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 SPATA3Q8NHX4 192 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 GLYATL2Q8WU03 294 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 ST6GALNAC6Q969X2 333 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 CITED4Q96RK1 184 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 LPAR2Q9HBW0 351 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 SDHAF2Q9NX18 166 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 GSKIPQ9P0R6 139 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 RNF150Q9ULK6 438 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 NSG2Q9Y328 171 aa9.21□□□□□ -0.94
SND1-212ENST00000485871 hCG_1809904A0A1W2PP81 198 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 A0A1W2PPE2 198 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 A0A1W2PR64 198 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 A0A1W2PRV1 198 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 RNF212BA8MTL3 300 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 NUDT19A8MXV4 375 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 ODF3BA8MYP8 253 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 B4DSR2 109 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 RNASEK-C17orf49H0YIS7 233 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 PGLYRP1O75594 196 aaPredicted RBP9.2□□□□□ -0.94
SND1-212ENST00000485871 NMBP08949 121 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 SLC25A6P12236 298 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 UCP1P25874 307 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 RAB7AP51149 207 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 S100A10P60903 97 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 HLA-DRB5Q30154 266 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 LDLRAD2Q5SZI1 272 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 GPR157Q5UAW9 335 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 VMO1Q7Z5L0 202 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 TBC1D26Q86UD7 250 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 ABHD12Q8N2K0 398 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 MAPK1IP1LQ8NDC0 245 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 BEND2Q8NDZ0 799 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 OR11H6Q8NGC7 330 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 GPHA2Q96T91 129 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 SIRT7Q9NRC8 400 aa9.2□□□□□ -0.94
SND1-212ENST00000485871 MAP1AP78559 2803 aaPredicted RBP9.2□□□□□ -0.94
SND1-212ENST00000485871 SAA2-SAA4A0A096LPE2 208 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 TRAV20A0A0B4J274 112 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 H0YIZ8 118 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 K7EPK0 472 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 ST8SIA3O43173 380 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 GAPDHP04406 335 aaKnown RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 SAA2P0DJI9 122 aaPredicted RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 PVALBP20472 110 aaPredicted RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 VDAC1P21796 283 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 RPL30P62888 115 aaKnown RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 KLRD1Q13241 179 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 TMEM249Q2WGJ8 235 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 THOC7Q6I9Y2 204 aaKnown RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 BTNL3Q6UXE8 466 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 ZNF833PQ6ZTB9 187 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 HSD17B13Q7Z5P4 300 aaPredicted RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 ZNF695Q8IW36 515 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 BAP18Q8IXM2 172 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 CIARTQ8N365 385 aaPredicted RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 EIF4E3Q8N5X7 224 aaKnown RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 TCTEX1D1Q8N7M0 179 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 LINC01356Q8N9X3 169 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 OR4P4Q8NGL7 312 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 OR1S1Q8NH92 325 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 RBPMSQ93062 196 aaKnown RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 CLEC7AQ9BXN2 247 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 KCNS2Q9ULS6 477 aa9.19□□□□□ -0.94
SND1-212ENST00000485871 RBM7Q9Y580 266 aaKnown RBP9.19□□□□□ -0.94
SND1-212ENST00000485871 LINC00473A8K010 186 aa9.18□□□□□ -0.94
SND1-212ENST00000485871 LY6LH3BQJ8 138 aa9.18□□□□□ -0.94
SND1-212ENST00000485871 RAB29O14966 203 aa9.18□□□□□ -0.94
SND1-212ENST00000485871 TNFSF12O43508 249 aa9.18□□□□□ -0.94
SND1-212ENST00000485871 JTBO76095 146 aa9.18□□□□□ -0.94
SND1-212ENST00000485871 TOX4O94842 621 aa9.18□□□□□ -0.94
SND1-212ENST00000485871 COX7A1P24310 79 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms