RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 KRT8P05787 483 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 MAP2K4P45985 399 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 XGP55808 180 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 MED21Q13503 144 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 RIPK1Q13546 671 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 TMEM187Q14656 261 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 RSU1Q15404 277 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 KISS1Q15726 138 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 C12orf74Q32Q52 190 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 TMEM30BQ3MIR4 351 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF585BQ52M93 769 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 RPL39P5Q59GN2 51 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 C6orf141Q5SZD1 244 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 ATAD3CQ5T2N8 411 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF497Q6ZNH5 498 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 SSX6Q7RTT6 188 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 C5orf24Q7Z6I8 188 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 GPHB5Q86YW7 130 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 SERPINA12Q8IW75 414 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 SLC35F2Q8IXU6 374 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 PRSS35Q8N3Z0 413 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 OR13C5Q8NGS8 318 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 OR4K15Q8NH41 348 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 TMEM68Q96MH6 324 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 SPAG8Q99932 426 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-210ENST00000485247 TM2D2Q9BX73 214 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 C6orf62Q9GZU0 229 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-210ENST00000485247 SEPSECSQ9HD40 501 aaKnown RBP3.81□□□□□ -1.8
PTPN4-210ENST00000485247 ENOPH1Q9UHY7 261 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 ST3GAL6Q9Y274 331 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 WASHC3Q9Y3C0 194 aa3.81□□□□□ -1.8
PTPN4-210ENST00000485247 FAM223BA6NKX1 122 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 GEMIN2O14893 280 aaKnown RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 SULT1B1O43704 296 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 RBBP9O75884 186 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 OR2J3O76001 311 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 TOMM40O96008 361 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 MT-ND2P03891 347 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 IGKV1-16P04430 117 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 HMGN1P05114 100 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 OR9G9P0C7N8 305 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 UBCP0CG48 685 aaKnown RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 RCC1P18754 421 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 MC5RP33032 325 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 ARL3P36405 182 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 FAM3BP58499 235 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 TWIST1Q15672 202 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 RNF212Q495C1 297 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 C6orf183Q5T699 404 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 ZNF691Q5VV52 312 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 LPCAT4Q643R3 524 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 CROCCP2Q86T23 111 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 FAM223AQ8IWN6 122 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 STX19Q8N4C7 294 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 DRAXINQ8NBI3 349 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 SETD9Q8NE22 299 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 OR2AK2Q8NG84 335 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 DYDC1Q8WWB3 177 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 NPIPB3Q92617 1050 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 ASB9Q96DX5 294 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 TBX5Q99593 518 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 TSNAXQ99598 290 aaKnown RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 RNF5Q99942 180 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 HOPXQ9BPY8 73 aaPredicted RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 FAM192AQ9GZU8 254 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 IFI27L2Q9H2X8 130 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 C5orf66Q9H5L9 145 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 GORASP2Q9H8Y8 452 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 TAF9BQ9HBM6 251 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 RAB9BQ9NP90 201 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 SAR1AQ9NR31 198 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 CELA1Q9UNI1 258 aa3.8□□□□□ -1.8
PTPN4-210ENST00000485247 EXOSC1Q9Y3B2 195 aaKnown RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 SAMHD1Q9Y3Z3 626 aaKnown RBP3.8□□□□□ -1.8
PTPN4-210ENST00000485247 FAT1Q14517 4588 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TRBV9A0A0B4J1U6 114 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 METTL15A6NJ78 407 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 A8MWP6 167 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 NDUFAB1O14561 156 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TSPAN4O14817 238 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 SNX3O60493 162 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 FGF2P09038 288 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 PSG1P11464 419 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 EPHA2P29317 976 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 HTD2P86397 168 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 CDK5Q00535 292 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TMEM244Q5VVB8 128 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 TMEM236Q5W0B7 351 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 OR4A47Q6IF82 309 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 FAM71F2Q6NXP2 309 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 C8orf82Q6P1X6 216 aaPredicted RBP3.79□□□□□ -1.8
PTPN4-210ENST00000485247 CLEC19AQ6UXS0 136 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 UNQ9165/PRO28630Q6UXU0 137 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 ASCL4Q6XD76 172 aa3.79□□□□□ -1.8
PTPN4-210ENST00000485247 NECAP1Q8NC96 275 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms