RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 CFHR3Q02985 330 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 PYHIN1Q6K0P9 492 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 ZNF562Q6V9R5 426 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 RNF152Q8N8N0 203 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 OR6F1Q8NGZ6 308 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 OR52I2Q8NH67 350 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 MCFD2Q8NI22 146 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 SECTM1Q8WVN6 248 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 SOSTQ9BQB4 213 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 MMP27Q9H306 513 aa13.99□□□□□ -0.17
SREBF1-213ENST00000485080 CCDC160A6NGH7 325 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 HLA-DMAP28067 261 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 HERV-K104P61576 105 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 RPL30P62888 115 aaKnown RBP13.98□□□□□ -0.17
SREBF1-213ENST00000485080 TREML4Q6UXN2 200 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 KCTD9Q7L273 389 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 MFSD4AQ8N468 514 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 FCAMRQ8WWV6 532 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 DIRAS2Q96HU8 199 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 HARBI1Q96MB7 349 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 ZNF2Q9BSG1 426 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-213ENST00000485080 C6orf62Q9GZU0 229 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-213ENST00000485080 SLC5A7Q9GZV3 580 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 CCL28Q9NRJ3 127 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 METTL1Q9UBP6 276 aaKnown RBP13.98□□□□□ -0.17
SREBF1-213ENST00000485080 KLK11Q9UBX7 282 aa13.98□□□□□ -0.17
SREBF1-213ENST00000485080 TSSC4Q9Y5U2 329 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-213ENST00000485080 SRRM4A7MD48 611 aaKnown RBP13.97□□□□□ -0.17
SREBF1-213ENST00000485080 FCN1O00602 326 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 SHOXO15266 292 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 IGHG4P01861 327 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 CSF1P09603 554 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 GNRHRP30968 328 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 KIR2DS2P43631 304 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 UBE2KP61086 200 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 CX3CL1P78423 397 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 TEX38Q6PEX7 206 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 C10orf99Q6UWK7 81 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 ZNF329Q86UD4 541 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 TEX45Q8NA69 505 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 SMIM4Q8WVI0 70 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 ZFP57Q9NU63 452 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 LINC00527Q9UJ94 153 aa13.97□□□□□ -0.17
SREBF1-213ENST00000485080 TCRBV4S1A1TA0A5B7 111 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 RBFOX2O43251 390 aaKnown RBP eCLIP13.96□□□□□ -0.172e-6■■□□□ 12.8
SREBF1-213ENST00000485080 SLC25A17O43808 307 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 CRYZL1O95825 349 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 ELANEP08246 267 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.17
SREBF1-213ENST00000485080 TNFSF8P32971 234 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 BRWD1-AS2P59051 145 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 FXYD4P59646 89 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 NDPQ00604 133 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 FOXE3Q13461 319 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 PLGLAQ15195 96 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 C19orf54Q5BKX5 351 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 PPP1R27Q86WC6 154 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 TMEM229BQ8NBD8 167 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 OR4S2Q8NH73 311 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 TAS2R8Q9NYW2 309 aa13.96□□□□□ -0.17
SREBF1-213ENST00000485080 ATP6V0E1O15342 81 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 FCGR3BO75015 233 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 TSPAN15O95858 294 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 CD74P04233 296 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 EGR2P11161 476 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-213ENST00000485080 VDAC1P21796 283 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 SLC6A1P30531 599 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 UCP3P55916 312 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 DGCR2P98153 550 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 ZNF818PQ6ZRF7 136 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 ARRDC1Q8N5I2 433 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 TCTEX1D1Q8N7M0 179 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 TCTEX1D2Q8WW35 142 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 DGCR14Q96DF8 476 aaKnown RBP13.95□□□□□ -0.18
SREBF1-213ENST00000485080 NUBP2Q9Y5Y2 271 aa13.95□□□□□ -0.18
SREBF1-213ENST00000485080 GSTZ1O43708 216 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-213ENST00000485080 PSMB8P28062 276 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 TSPAN5P62079 268 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 CATR1Q13166 79 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 IL18Q14116 193 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 VMA21Q3ZAQ7 101 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 LPCAT3Q6P1A2 487 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 OR4F17Q8NGA8 305 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 CD300LFQ8TDQ1 290 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 OR4F4Q96R69 305 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 DCUN1D5Q9BTE7 237 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 FXYD6Q9H0Q3 95 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 PARP11Q9NR21 331 aa13.94□□□□□ -0.18
SREBF1-213ENST00000485080 TRAV41A0A0B4J266 112 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 CA2P00918 260 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 IGLV1-40P01703 118 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 CD3DP04234 171 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 TAS2R19P59542 299 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 SSBP2P81877 361 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-213ENST00000485080 TMEM267Q0VDI3 215 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-213ENST00000485080 MRGPRG-AS1Q2M3A8 158 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 NSUN5P1Q3KNT7 163 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms