RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CDKN3Q16667 212 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 MUC21Q5SSG8 566 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 AMMECR1Q9Y4X0 333 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-207ENST00000483888 C1QAP02745 245 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 SLC25A28Q96A46 364 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 RPRMQ9NS64 109 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 PRNDQ9UKY0 176 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 DOCK1Q14185 1865 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 CD1AP06126 327 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 MRGPRX3Q96LB0 322 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 PRSS27Q9BQR3 290 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 SSTR5P35346 364 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 PXNP49023 591 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-207ENST00000483888 SRSF6Q13247 344 aaKnown RBP8.88□□□□□ -0.99
COL12A1-207ENST00000483888 ONECUT1Q9UBC0 465 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 SERGEFQ9UGK8 458 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 TOPAZ1Q8N9V7 1692 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 NABP2Q9BQ15 211 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 TRBV5-4A0A0C4DH59 114 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 SH2D7A6NKC9 451 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-207ENST00000483888 C12orf76Q8N812 135 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-207ENST00000483888 AGBL5Q8NDL9 886 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 OR4C3Q8NH37 302 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 MAP1BP46821 2468 aaKnown RBP8.88□□□□□ -0.99
COL12A1-207ENST00000483888 SHISA8B8ZZ34 492 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 LINC01387J3KSC0 135 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 CYB561P49447 251 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 ERVK11-1P61568 191 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 PGPEP1Q9NXJ5 209 aa8.88□□□□□ -0.99
COL12A1-207ENST00000483888 KLKB1P03952 638 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 RPL31P62899 125 aaKnown RBP8.87□□□□□ -0.99
COL12A1-207ENST00000483888 SPRYD7Q5W111 196 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 ATP5LO75964 103 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 FOXL2P58012 376 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TNXAQ16473 311 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 C19orf54Q5BKX5 351 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 RGPD3A6NKT7 1758 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-207ENST00000483888 RGPD4Q7Z3J3 1758 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TRBV5-3A0A0A0MS03 114 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TMPRSS3P57727 454 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TBR1Q16650 682 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 C1orf43Q9BWL3 253 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 FOXQ1Q9C009 403 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 KLHDC2Q9Y2U9 406 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TRAV21A0A0B4J279 112 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 EDIL3O43854 480 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 APELAP0DMC3 54 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TBC1D29Q9UFV1 150 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 TSSC4Q9Y5U2 329 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-207ENST00000483888 CAMTA1Q9Y6Y1 1673 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 HTN1P15515 57 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 GZMMP51124 257 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 PRSS12P56730 875 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 MPV17L2Q567V2 206 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 WFDC8Q8IUA0 241 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 IZUMO1RA6ND01 250 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 MFAP4P55083 255 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 YPEL5P62699 121 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 KIR3DS1Q14943 382 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 MEIG1Q5JSS6 88 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 ZNF793Q6ZN11 406 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 C1orf174Q8IYL3 243 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 CLEC1BQ9P126 229 aa8.87□□□□□ -0.99
COL12A1-207ENST00000483888 SF3B6Q9Y3B4 125 aaKnown RBP8.87□□□□□ -0.99
COL12A1-207ENST00000483888 PGPA6NDG6 321 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 RPL36A-HNRNPH2H7BZ11 118 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 IFITM1P13164 125 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 DRD1P21728 446 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 LRRC10Q5BKY1 277 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 WFDC5Q8TCV5 224 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 KLF12Q9Y4X4 402 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 ZGRF1Q86YA3 2104 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 A0A1W2PQM1 296 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 TMEM238C9JI98 176 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 HSPE1P61604 102 aaKnown RBP8.86□□□□□ -0.99
COL12A1-207ENST00000483888 DLX4Q92988 240 aaPredicted RBP8.86□□□□□ -0.99
COL12A1-207ENST00000483888 RNF122Q9H9V4 155 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 ALG1L2C9J202 215 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 SHISA7A6NL88 538 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 H0YIG0 161 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 M0R1B8 84 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 FOXB1Q99853 325 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 FAM181BA6NEQ2 426 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 PPP1CAP62136 330 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 GNB1LQ9BYB4 327 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 ITGB4P16144 1822 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 CEACAM18A8MTB9 384 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 OR1N1Q8NGS0 311 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 CD5P06127 495 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 PRELID3AQ96N28 172 aa8.86□□□□□ -0.99
COL12A1-207ENST00000483888 HYPMO75409 117 aa8.85□□□□□ -0.99
COL12A1-207ENST00000483888 RPS20P60866 119 aaKnown RBP8.85□□□□□ -0.99
COL12A1-207ENST00000483888 PSG6Q00889 435 aa8.85□□□□□ -0.99
COL12A1-207ENST00000483888 RNPS1Q15287 305 aaKnown RBP8.85□□□□□ -0.99
COL12A1-207ENST00000483888 PSG3Q16557 428 aa8.85□□□□□ -0.99
COL12A1-207ENST00000483888 ANKRD33Q7Z3H0 272 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms