RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 CATR1Q13166 79 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 MIDNQ504T8 468 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 TMEM200BQ69YZ2 307 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 TCF23Q7RTU1 214 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 RNASE11Q8TAA1 199 aaKnown RBP14.12□□□□□ -0.15
MRPL28-210ENST00000483764 SMIM3Q9BZL3 60 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 CALYQ9NYX4 217 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 CACFD1Q9UGQ2 172 aa14.12□□□□□ -0.15
MRPL28-210ENST00000483764 KBTBD11-OT1A0A1B0GTJ5 212 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 ZNF729A6NN14 1252 aaPredicted RBP14.11□□□□□ -0.15
MRPL28-210ENST00000483764 TSPAN4O14817 238 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 RAB2AP61019 212 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 POLR2GP62487 172 aaKnown RBP eCLIP14.11□□□□□ -0.15
MRPL28-210ENST00000483764 GNB2P62879 340 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 C17orf58Q2M2W7 97 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 DEFB113Q30KQ7 82 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 ZNF645Q8N7E2 425 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.11□□□□□ -0.15
MRPL28-210ENST00000483764 CLRN3Q8NCR9 226 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 NINJ1Q92982 152 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 OR1A1Q9P1Q5 309 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 RNF150Q9ULK6 438 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 MMP24Q9Y5R2 645 aa14.11□□□□□ -0.15
MRPL28-210ENST00000483764 VWC2LB2RUY7 222 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 DNASE2O00115 360 aaPredicted RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 SSSCA1O60232 199 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 IGHV2-5P01817 119 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 HTD2P86397 168 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 CLDND2Q8NHS1 167 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 LINC00574Q9H8X3 128 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 WFDC1Q9HC57 220 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 FLNBO75369 2602 aaKnown RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 ASH1LQ9NR48 2969 aaKnown RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 TOR1AO14656 332 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 PRH1P02810 166 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 H2AFB1P0C5Y9 115 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 SNCAP37840 140 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 CEACAM6P40199 344 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 SULT1A1P50225 295 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 ARHGDIBP52566 201 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 LMO4P61968 165 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 NHLH2Q02577 135 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 DHRS7BQ6IAN0 325 aaPredicted RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 LRRC75A-AS1Q8N1F1 130 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 OR52L2PQ8NGH6 319 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 ATP5SQ99766 215 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 SSBP3Q9BWW4 388 aaPredicted RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 PARD6GQ9BYG4 376 aaPredicted RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 GAL3ST2Q9H3Q3 398 aa14.1□□□□□ -0.15
MRPL28-210ENST00000483764 UNKLQ9H9P5 680 aaKnown RBP14.1□□□□□ -0.15
MRPL28-210ENST00000483764 IGHV4-30-2A0A087WSY4 118 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 IGSF23A1L1A6 192 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 FAM24AA6NFZ4 105 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 F2RL2O00254 374 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 IFNA5P01569 189 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 HBE1P02100 147 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 OR8U8P0C7N1 319 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 OMGP23515 440 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 HBG1P69891 147 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 HBG2P69892 147 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 LTC4SQ16873 150 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 CLEC12BQ2HXU8 276 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 CXorf66Q5JRM2 361 aaPredicted RBP14.09□□□□□ -0.15
MRPL28-210ENST00000483764 ZNF66Q6ZN08 573 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 GPR146Q96CH1 333 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 MBD6Q96DN6 1003 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 ZNF714Q96N38 554 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 MS4A7Q9GZW8 240 aaPredicted RBP14.09□□□□□ -0.15
MRPL28-210ENST00000483764 RPUSD1Q9UJJ7 312 aaKnown RBP14.09□□□□□ -0.15
MRPL28-210ENST00000483764 KCNS2Q9ULS6 477 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 ABCA12Q86UK0 2595 aa14.09□□□□□ -0.15
MRPL28-210ENST00000483764 CHST1O43916 411 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 CCL3L1P16619 93 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 AKR1C2P52895 323 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 PUSL1Q8N0Z8 303 aaKnown RBP14.08□□□□□ -0.16
MRPL28-210ENST00000483764 OR51H1Q8NH63 302 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 C8orf46Q8TAG6 207 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 CD300LFQ8TDQ1 290 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 EDARADDQ8WWZ3 215 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 RAB39BQ96DA2 213 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 IDI2-AS1Q9NZ38 188 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 GNG12Q9UBI6 72 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 ARID1AO14497 2285 aa14.08□□□□□ -0.16
MRPL28-210ENST00000483764 APCP25054 2843 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 LOC105371242A0A075B767 164 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 IGHV3-43A0A0B4J1X8 118 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 TXNL1O43396 289 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 SYNGR2O43760 224 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 POLQO75417 2590 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 IGLV2-14P01704 120 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 SFTA3P0C7M3 94 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 OR8U9P0C7N5 309 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 IGHV3-43DP0DP04 118 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 ATF4P18848 351 aaPredicted RBP14.07□□□□□ -0.16
MRPL28-210ENST00000483764 PAX6P26367 422 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 LOXL3P58215 753 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 KIAA2026Q5HYC2 2103 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 DRAM1Q8N682 238 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 LY6G5BQ8NDX9 201 aa14.07□□□□□ -0.16
MRPL28-210ENST00000483764 OR5C1Q8NGR4 320 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms