RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FAM131AQ6UXB0 335 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 PPP1R27Q86WC6 154 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 ODF3L1Q8IXM7 274 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 C10orf67Q8IYJ2 551 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 Q8N1X5 172 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 NKAIN3Q8N8D7 197 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 OR13C5Q8NGS8 318 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 MRPL30Q8TCC3 161 aaKnown RBP4.5□□□□□ -1.69
CSDE1-207ENST00000483407 CASTOR1Q8WTX7 329 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 TMEM170AQ8WVE7 144 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 ORAI1Q96D31 301 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 RDH12Q96NR8 316 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 NEDD4LQ96PU5 975 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 C9orf16Q9BUW7 83 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 FBXL15Q9H469 300 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 EDA2RQ9HAV5 297 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 SCPEP1Q9HB40 452 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 RANGRFQ9HD47 186 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-207ENST00000483407 CNOT2Q9NZN8 540 aaKnown RBP4.5□□□□□ -1.69
CSDE1-207ENST00000483407 GHRLQ9UBU3 117 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 EXOSC1Q9Y3B2 195 aaKnown RBP4.5□□□□□ -1.69
CSDE1-207ENST00000483407 FBXO7Q9Y3I1 522 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 NUBP2Q9Y5Y2 271 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 STAB2Q8WWQ8 2551 aa4.5□□□□□ -1.69
CSDE1-207ENST00000483407 TRAV8-7A0A075B6U6 113 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 A0A0G2JLM5 398 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 C13orf42A0A1B0GVH6 325 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 A0A1W2PPK0 400 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 CBY3A6NI87 242 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 PTGES3LE9PB15 166 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 H0YJW9 148 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 SLC22A1O15245 554 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 PROP1O75360 226 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 BAG2O95816 211 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 IGLV1-51P01701 117 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 TRGV3P03979 118 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 MAPK3P27361 379 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 OR3A3P47888 321 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 TAS2R43P59537 309 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 MED22Q15528 200 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 HMGN3Q15651 99 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 TATDN3Q17R31 274 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 MOGAT2Q3SYC2 334 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 C6orf141Q5SZD1 244 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 DMKNQ6E0U4 476 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 ZNF562Q6V9R5 426 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 ADAMTSL5Q6ZMM2 481 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 GTSCR1Q86UQ5 136 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 TMEM116Q8NCL8 245 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 ZNF555Q8NEP9 628 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 LFNGQ8NES3 379 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 APH1BQ8WW43 257 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 IL1F10Q8WWZ1 152 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 THRSPQ92748 146 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 FAM46BQ96A09 425 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 MS4A10Q96PG2 267 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 CLCC1Q96S66 551 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 TSNAXQ99598 290 aaKnown RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 SLC29A1Q99808 456 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 RNF5Q99942 180 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 UQCC2Q9BRT2 126 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 FAM103A1Q9BTL3 118 aaKnown RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 IFI27L2Q9H2X8 130 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 TUBA4BQ9H853 241 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 CHMP1AQ9HD42 196 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 ZNF355PQ9NSJ1 428 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 METTL1Q9UBP6 276 aaKnown RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 DIMT1Q9UNQ2 313 aaKnown RBP4.49□□□□□ -1.69
CSDE1-207ENST00000483407 WASHC3Q9Y3C0 194 aa4.49□□□□□ -1.69
CSDE1-207ENST00000483407 SORL1Q92673 2214 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 TRBV5-7A0A0A0MS05 114 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 H3BNX3 289 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 H3BUA1 57 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 FCN1O00602 326 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 ITGB1BP1O14713 200 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 PAGE4O60829 102 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 WBP4O75554 376 aaKnown RBP4.48□□□□□ -1.69
CSDE1-207ENST00000483407 CA2P00918 260 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 UBBP0CG47 229 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 CT45A6P0DMU7 189 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 CT45A5P0DMU8 189 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 CT45A7P0DMV0 189 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 RPS11P62280 158 aaKnown RBP eCLIP4.48□□□□□ -1.69
CSDE1-207ENST00000483407 SMN1Q16637 294 aaKnown RBP4.48□□□□□ -1.69
CSDE1-207ENST00000483407 HAGHQ16775 308 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 RPL39P5Q59GN2 51 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 SIGIRRQ6IA17 410 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 LCN12Q6JVE5 192 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-207ENST00000483407 MOB1BQ7L9L4 216 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 HAPLN4Q86UW8 402 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 ZFP41Q8N8Y5 198 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 POC5Q8NA72 575 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 OSR1Q8TAX0 266 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-207ENST00000483407 SETD6Q8TBK2 473 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 TMEM80Q96HE8 168 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 PGLYRP3Q96LB9 341 aa4.48□□□□□ -1.69
CSDE1-207ENST00000483407 TMEM68Q96MH6 324 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms