RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PTX4Q96A99 478 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 RNF5Q99942 180 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 PECRQ9BY49 303 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 TINAGL1Q9GZM7 467 aaPredicted RBP10.56□□□□□ -0.72
VARS-226ENST00000483275 PLGRKTQ9HBL7 147 aa10.56□□□□□ -0.72
VARS-226ENST00000483275 PEF1Q9UBV8 284 aaKnown RBP10.56□□□□□ -0.72
VARS-226ENST00000483275 A0A0G2JLM5 398 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 SRRM4A7MD48 611 aaKnown RBP10.55□□□□□ -0.72
VARS-226ENST00000483275 CRYGBP07316 175 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 PSMB9P28065 219 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 TMEM50BP56557 158 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 TAGLNQ01995 201 aaKnown RBP10.55□□□□□ -0.72
VARS-226ENST00000483275 MRGPRG-AS1Q2M3A8 158 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 IGSF11Q5DX21 431 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 LCN12Q6JVE5 192 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 PHB2Q99623 299 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 CMSS1Q9BQ75 279 aaKnown RBP10.55□□□□□ -0.72
VARS-226ENST00000483275 SDHAF2Q9NX18 166 aa10.55□□□□□ -0.72
VARS-226ENST00000483275 AK6Q9Y3D8 172 aaKnown RBP10.55□□□□□ -0.72
VARS-226ENST00000483275 TRDCB7Z8K6 153 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 H0Y980 276 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 H3BUA1 57 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 MYL9P24844 172 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
VARS-226ENST00000483275 CD81P60033 236 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 RAB11BQ15907 218 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 ZNF343Q6P1L6 599 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 C19orf35Q6ZS72 473 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 SPARTQ8N0X7 666 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 FAM89BQ8N5H3 189 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 URM1Q9BTM9 101 aaKnown RBP10.54□□□□□ -0.72
VARS-226ENST00000483275 HIPK2Q9H2X6 1198 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 RIMS4Q9H426 269 aaPredicted RBP10.54□□□□□ -0.72
VARS-226ENST00000483275 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
VARS-226ENST00000483275 PLECQ15149 4684 aaKnown RBP10.53□□□□□ -0.72
VARS-226ENST00000483275 MSGN1A6NI15 193 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 BMPR1BO00238 502 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 SLC17A2O00624 439 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 PDCD5O14737 125 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 SHOXO15266 292 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 IFNA6P05013 189 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 CD7P09564 240 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 LGALS7P47929 136 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 PSMD7P51665 324 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 FABP5Q01469 135 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 ZNF45Q02386 682 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 EXOSC2Q13868 293 aaKnown RBP10.53□□□□□ -0.72
VARS-226ENST00000483275 TNXAQ16473 311 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 MOGAT2Q3SYC2 334 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 CD300EQ496F6 205 aaPredicted RBP10.53□□□□□ -0.72
VARS-226ENST00000483275 C10orf55Q5SWW7 151 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 UBE2UQ5VVX9 321 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 ZNF773Q6PK81 442 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 TMEM91Q6ZNR0 172 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 Q8N402 240 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 DEFB125Q8N687 156 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 ADAD2Q8NCV1 583 aaKnown RBP10.53□□□□□ -0.72
VARS-226ENST00000483275 AKIP1Q9NQ31 210 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 NDUFB11Q9NX14 153 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 ZNF230Q9UIE0 474 aaPredicted RBP10.53□□□□□ -0.72
VARS-226ENST00000483275 FRAS1Q86XX4 4008 aa10.53□□□□□ -0.72
VARS-226ENST00000483275 A0A075B6Q4 140 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 RBMY1BA6NDE4 496 aaKnown RBP10.52□□□□□ -0.73
VARS-226ENST00000483275 RBMY1EA6NEQ0 496 aaKnown RBP10.52□□□□□ -0.73
VARS-226ENST00000483275 MPPED1O15442 326 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 FABP7O15540 132 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 JTBO76095 146 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 OR2A4O95047 310 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 HLA-AP01891 365 aaKnown RBP10.52□□□□□ -0.73
VARS-226ENST00000483275 RBMY1DP0C7P1 496 aaKnown RBP10.52□□□□□ -0.73
VARS-226ENST00000483275 GSTT2P0CG29 244 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 GSTT2BP0CG30 244 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 RHOGP84095 191 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 SSX1Q16384 188 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 ACOT12Q8WYK0 555 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 HSF4Q9ULV5 492 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 MGAT4AQ9UM21 535 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 KCNK7Q9Y2U2 307 aa10.52□□□□□ -0.73
VARS-226ENST00000483275 SHISA3A0PJX4 238 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 PPP5D1E7EU14 171 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 J3QRK9 145 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 BRI3O95415 125 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 CRYZL1O95825 349 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 FCGR3AP08637 254 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 CD37P11049 281 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 AADACP22760 399 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 PRSS8Q16651 343 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 KCTD21Q4G0X4 260 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 HES5Q5TA89 166 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.51□□□□□ -0.73
VARS-226ENST00000483275 SRSF12Q8WXF0 261 aaKnown RBP10.51□□□□□ -0.73
VARS-226ENST00000483275 CACNG8Q8WXS5 425 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 NEURL2Q9BR09 285 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 VCX3AQ9NNX9 186 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 V9GY05 133 aa10.51□□□□□ -0.73
VARS-226ENST00000483275 A0A0B4J203 849 aa10.5□□□□□ -0.73
VARS-226ENST00000483275 TMEM272A0A1B0GTI8 110 aa10.5□□□□□ -0.73
VARS-226ENST00000483275 TRDV1A0A1B0GX56 115 aa10.5□□□□□ -0.73
VARS-226ENST00000483275 LINC00473A8K010 186 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms