RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 NPFFO15130 113 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 TXNL1O43396 289 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 OR2A4O95047 310 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 S1PR2O95136 353 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 SIX6O95475 246 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 TGFAP01135 160 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 IGKV1-5P01602 117 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 IGHV1-69P01742 117 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 GAPDHP04406 335 aaKnown RBP6.65□□□□□ -1.34
USP4-210ENST00000483212 IGHV4-38-2P0DP08 117 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 KIR2DS2P43631 304 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 LPAR6P43657 344 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 IL15RAQ13261 267 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 MIDNQ504T8 468 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 NMSQ5H8A3 153 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 TMEM268Q5VZI3 342 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 GGNBP1Q5YKI7 109 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 RUSC1-AS1Q66K80 236 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 LYZL2Q7Z4W2 148 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 TGIF2LXQ8IUE1 241 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 RBPMSQ93062 196 aaKnown RBP6.65□□□□□ -1.34
USP4-210ENST00000483212 SEC22AQ96IW7 307 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 OR2A7Q96R45 310 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 PLEKHA2Q9HB19 425 aa6.65□□□□□ -1.34
USP4-210ENST00000483212 FLNAP21333 2647 aaKnown RBP6.64□□□□□ -1.35
USP4-210ENST00000483212 OOSP1A8MZH6 123 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 G3V3Q6 166 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 FCGR3BO75015 233 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 HPRT1P00492 218 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 IGKV1-16P04430 117 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 SERPINE2P07093 398 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 HOXB5P09067 269 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 RPA2P15927 270 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 SAA4P35542 130 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 CEACAM3P40198 252 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 POU2AF1Q16633 256 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 FBLN7Q53RD9 439 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 TMEM177Q53S58 311 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 CYB5R2Q6BCY4 276 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 DHRS7BQ6IAN0 325 aaPredicted RBP6.64□□□□□ -1.35
USP4-210ENST00000483212 PDPNQ86YL7 162 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 ZNF695Q8IW36 515 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 OR8H3Q8N146 312 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 UXS1Q8NBZ7 420 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 OR4S2Q8NH73 311 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 CD300LFQ8TDQ1 290 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 RPEQ96AT9 228 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 MALSU1Q96EH3 234 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 OR10C1Q96KK4 312 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 FYTTD1Q96QD9 318 aaKnown RBP6.64□□□□□ -1.35
USP4-210ENST00000483212 ZNF436Q9C0F3 470 aaPredicted RBP6.64□□□□□ -1.35
USP4-210ENST00000483212 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 COMMD9Q9P000 198 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 PRELID3BQ9Y3B1 194 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 BAHCC1Q9P281 2608 aa6.64□□□□□ -1.35
USP4-210ENST00000483212 IGHV3OR16-10A0A075B7F0 116 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 FAM90A9PA6NNJ1 464 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 TIMM23O14925 209 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 SMAD7O15105 426 aaKnown RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 PITX3O75364 302 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 CCNKO75909 580 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 CRYZL1O95825 349 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 IL6RP08887 468 aaPredicted RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 GIPP09681 153 aaPredicted RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 RRASP10301 218 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 VDAC1P21796 283 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 PAX6P26367 422 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 MC5RP33032 325 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 CD83Q01151 205 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 TAGLNQ01995 201 aaKnown RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 IZUMO4Q1ZYL8 232 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 Q6ZRM9 215 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 AKAP14Q86UN6 197 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 TCTE3Q8IZS6 198 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 LSM10Q969L4 123 aaKnown RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 GPR146Q96CH1 333 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 RANGRFQ9HD47 186 aaPredicted RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 ITGB1BP2Q9UKP3 347 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 WASHC3Q9Y3C0 194 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 TMED3Q9Y3Q3 217 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 HILPDAQ9Y5L2 63 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 SOX21Q9Y651 276 aaPredicted RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 CELSR1Q9NYQ6 3014 aa6.63□□□□□ -1.35
USP4-210ENST00000483212 FLNBO75369 2602 aaKnown RBP6.63□□□□□ -1.35
USP4-210ENST00000483212 MYO9AB2RTY4 2548 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 NOTCH2Q04721 2471 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 IGHV3-72A0A0B4J1Y9 119 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 A0A0U1RQK1 487 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 MARCH11A6NNE9 402 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 CD5LO43866 347 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 VENTXO95231 258 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 IGLV2-23P01705 113 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 APOA2P02652 100 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 SLC25A6P12236 298 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 NQO2P16083 231 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 EPHA1P21709 976 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 CD1BP29016 333 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 G6PCP35575 357 aa6.62□□□□□ -1.35
USP4-210ENST00000483212 RAB13P51153 203 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms