RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 YIF1BQ5BJH7 314 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 C6orf141Q5SZD1 244 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 RNLSQ5VYX0 342 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 CLVS1Q8IUQ0 354 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 Q8N402 240 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 OR2C3Q8N628 320 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 CLRN3Q8NCR9 226 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 APH1BQ8WW43 257 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 NEDD4LQ96PU5 975 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 TSNAXQ99598 290 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 AGMATQ9BSE5 352 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 C11orf54Q9H0W9 315 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 PRR13Q9NZ81 148 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 PEF1Q9UBV8 284 aaKnown RBP5.6□□□□□ -1.51
CSDE1-206ENST00000483030 CLEC2DQ9UHP7 191 aa5.6□□□□□ -1.51
CSDE1-206ENST00000483030 A0A1B0GVG6 124 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 DBX1A6NMT0 343 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF785A8K8V0 405 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 H3BNX3 289 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 H3BUA1 57 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 SLC25A17O43808 307 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 WBP4O75554 376 aaKnown RBP5.59□□□□□ -1.51
CSDE1-206ENST00000483030 CIB2O75838 187 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 LY6G6CO95867 125 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 CD7P09564 240 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 FSTP19883 344 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 BMI1P35226 326 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 CEACAM6P40199 344 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 MECP2P51608 486 aaKnown RBP5.59□□□□□ -1.51
CSDE1-206ENST00000483030 CD81P60033 236 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 DEFA5Q01523 94 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 ID3Q02535 119 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 PJVKQ0ZLH3 352 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF674Q2M3X9 581 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 RPEL1Q2QD12 228 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 OR10K2Q6IF99 312 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF343Q6P1L6 599 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 C6orf201Q7Z4U5 140 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 DEFB125Q8N687 156 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 ZNF383Q8NA42 475 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 SETD6Q8TBK2 473 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 PGLYRP3Q96LB9 341 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 SLC29A1Q99808 456 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 NEURL2Q9BR09 285 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 CHMP1AQ9HD42 196 aaPredicted RBP5.59□□□□□ -1.51
CSDE1-206ENST00000483030 NUDT15Q9NV35 164 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 SIGLEC8Q9NYZ4 499 aa5.59□□□□□ -1.51
CSDE1-206ENST00000483030 TNCP24821 2201 aa5.59□□□□□ -1.52
CSDE1-206ENST00000483030 PNMA8CA0A1B0GUJ8 204 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 OR11H12B2RN74 326 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 ITGB1BP1O14713 200 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 RBMXL2O75526 392 aaKnown RBP5.58□□□□□ -1.52
CSDE1-206ENST00000483030 SPDEFO95238 335 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 CRYZL1O95825 349 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 NAPSAO96009 420 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 APELAP0DMC3 54 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 MYL12AP19105 171 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 AADACP22760 399 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 HTR2CP28335 458 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 SSBP2P81877 361 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-206ENST00000483030 CD300EQ496F6 205 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF880Q6PDB4 577 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 SVOPQ8N4V2 548 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 LINC00476Q8WZB0 136 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 SNAPC3Q92966 411 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 USMG5Q96IX5 58 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 DERL3Q96Q80 235 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 TINAGL1Q9GZM7 467 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-206ENST00000483030 WFDC10AQ9H1F0 79 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 SLC2A8Q9NY64 477 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 OR1A1Q9P1Q5 309 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 GHRLQ9UBU3 117 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF221Q9UK13 617 aa5.58□□□□□ -1.52
CSDE1-206ENST00000483030 DIMT1Q9UNQ2 313 aaKnown RBP5.58□□□□□ -1.52
CSDE1-206ENST00000483030 EXOSC1Q9Y3B2 195 aaKnown RBP5.58□□□□□ -1.52
CSDE1-206ENST00000483030 MSGN1A6NI15 193 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 OR2A4O95047 310 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 IGLV2-23P01705 113 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 APOA2P02652 100 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 ZBTB25P24278 435 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 LGALS7P47929 136 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 RPS27AP62979 156 aaKnown RBP5.57□□□□□ -1.52
CSDE1-206ENST00000483030 GUCA2BQ16661 112 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 PDPNQ86YL7 162 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 ZNF485Q8NCK3 441 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 OR2K2Q8NGT1 345 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 EDARADDQ8WWZ3 215 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 C6orf62Q9GZU0 229 aaPredicted RBP5.57□□□□□ -1.52
CSDE1-206ENST00000483030 SRD5A3Q9H8P0 318 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 SLC35D1Q9NTN3 355 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 PLEKHJ1Q9NW61 149 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 RHBDL2Q9NX52 303 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 COA4Q9NYJ1 87 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 PEMTQ9UBM1 199 aa5.57□□□□□ -1.52
CSDE1-206ENST00000483030 IRGMA1A4Y4 181 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 CXorf65A6NEN9 183 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 SRRM4A7MD48 611 aaKnown RBP5.56□□□□□ -1.52
CSDE1-206ENST00000483030 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
CSDE1-206ENST00000483030 M0R1X1 148 aa5.56□□□□□ -1.52
CSDE1-206ENST00000483030 BMPR1BO00238 502 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms