RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
CPSF4-212ENST00000482251 PYHIN1Q6K0P9 492 aa8.09□□□□□ -1.11
CPSF4-212ENST00000482251 HAPLN4Q86UW8 402 aa8.09□□□□□ -1.11
CPSF4-212ENST00000482251 H1FOOQ8IZA3 346 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-212ENST00000482251 OR5T1Q8NG75 326 aa8.09□□□□□ -1.11
CPSF4-212ENST00000482251 RNF5Q99942 180 aa8.09□□□□□ -1.11
CPSF4-212ENST00000482251 ZNF256Q9Y2P7 627 aaPredicted RBP8.09□□□□□ -1.11
CPSF4-212ENST00000482251 COL7A1Q02388 2944 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 SRRM4A7MD48 611 aaKnown RBP8.08□□□□□ -1.12
CPSF4-212ENST00000482251 DTYMKP23919 212 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 CD40LGP29965 261 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 DUTP33316 252 aaKnown RBP8.08□□□□□ -1.12
CPSF4-212ENST00000482251 TNXAQ16473 311 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 AKIRIN2Q53H80 203 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 IDNKQ5T6J7 187 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 HACD4Q5VWC8 232 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 POC5Q8NA72 575 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 OR5H6Q8NGV6 325 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 PHB2Q99623 299 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 ASCL2Q99929 193 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 RHBDL2Q9NX52 303 aa8.08□□□□□ -1.12
CPSF4-212ENST00000482251 ZMAT5Q9UDW3 170 aaKnown RBP8.08□□□□□ -1.12
CPSF4-212ENST00000482251 IGKV1D-13A0A0B4J2D9 117 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 ANKRD34BA5PLL1 514 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 SSX5O60225 188 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 FCGR3BO75015 233 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 TUSC2O75896 110 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 DIRAS3O95661 229 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 CRYGBP07316 175 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 IGKV1-13P0DP09 117 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 PTHLHP12272 177 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 TGFBR1P36897 503 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 PITPNAQ00169 270 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 DCTN2Q13561 401 aaKnown RBP8.07□□□□□ -1.12
CPSF4-212ENST00000482251 TMEM177Q53S58 311 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 KCTD9Q7L273 389 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 TPRA1Q86W33 373 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 ACOT12Q8WYK0 555 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 DDB2Q92466 427 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 SLC25A38Q96DW6 304 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 CENPOQ9BU64 300 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 RSRP1Q9BUV0 290 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 SLA2Q9H6Q3 261 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.07□□□□□ -1.12
CPSF4-212ENST00000482251 COA4Q9NYJ1 87 aa8.07□□□□□ -1.12
CPSF4-212ENST00000482251 LSM4Q9Y4Z0 139 aaKnown RBP8.07□□□□□ -1.12
CPSF4-212ENST00000482251 C13orf42A0A1B0GVH6 325 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 MPPED1O15442 326 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 HSPB1P04792 205 aaKnown RBP8.06□□□□□ -1.12
CPSF4-212ENST00000482251 SAA1P0DJI8 122 aaPredicted RBP8.06□□□□□ -1.12
CPSF4-212ENST00000482251 SPNP16150 400 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 CD36P16671 472 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 LGALS7P47929 136 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 RPL30P62888 115 aaKnown RBP8.06□□□□□ -1.12
CPSF4-212ENST00000482251 ARL6IP1Q15041 203 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 SRSF7Q16629 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
CPSF4-212ENST00000482251 MRGPRG-AS1Q2M3A8 158 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 VMA21Q3ZAQ7 101 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 C10orf55Q5SWW7 151 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 Q6ZS49 121 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 VKORC1L1Q8N0U8 176 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 ZNF645Q8N7E2 425 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 GVQW1Q8N7I0 195 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 RHOVQ96L33 236 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 DCUN1D5Q9BTE7 237 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 YTHDF1Q9BYJ9 559 aaKnown RBP8.06□□□□□ -1.12
CPSF4-212ENST00000482251 SPATA2Q9UM82 520 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 OR2W1Q9Y3N9 320 aa8.06□□□□□ -1.12
CPSF4-212ENST00000482251 TRAV18A0A075B6X5 111 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 MEIS3P1A6NDR6 274 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 MSGN1A6NI15 193 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 TNFSF12O43508 249 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 RBMXL2O75526 392 aaKnown RBP8.05□□□□□ -1.12
CPSF4-212ENST00000482251 SCGNO76038 276 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 IGLV2-14P01704 120 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 TRBV12-3P01733 135 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 PRH1P02810 166 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 RRASP10301 218 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 INSL3P51460 131 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ARPC4P59998 168 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 UBE2KP61086 200 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 PRSS8Q16651 343 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ACSM6Q6P461 480 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ZNF429Q86V71 674 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 TCTEX1D2Q8WW35 142 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 SRSF12Q8WXF0 261 aaKnown RBP8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ADTRPQ96IZ2 230 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 DCSTAMPQ9H295 470 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ZNF430Q9H8G1 570 aaPredicted RBP8.05□□□□□ -1.12
CPSF4-212ENST00000482251 TAS2R8Q9NYW2 309 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ANXA10Q9UJ72 324 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 ADAM30Q9UKF2 790 aa8.05□□□□□ -1.12
CPSF4-212ENST00000482251 RBMX2Q9Y388 322 aaKnown RBP8.05□□□□□ -1.12
CPSF4-212ENST00000482251 HLA-DQB1P01920 261 aa8.04□□□□□ -1.12
CPSF4-212ENST00000482251 GP9P14770 177 aa8.04□□□□□ -1.12
CPSF4-212ENST00000482251 LSM3P62310 102 aaKnown RBP8.04□□□□□ -1.12
CPSF4-212ENST00000482251 DYRK1AQ13627 763 aa8.04□□□□□ -1.12
CPSF4-212ENST00000482251 KCTD21Q4G0X4 260 aa8.04□□□□□ -1.12
CPSF4-212ENST00000482251 CNIH2Q6PI25 160 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms