RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 CTDSPLO15194 276 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 FCER2P06734 321 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 ELANEP08246 267 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 HLA-DMAP28067 261 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 HRH1P35367 487 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 CRIP2P52943 208 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-212ENST00000482152 TSPAN5P62079 268 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 CX3CL1P78423 397 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 TMEM267Q0VDI3 215 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-212ENST00000482152 FOXE3Q13461 319 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 EIF4EBP1Q13541 118 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-212ENST00000482152 VMA21Q3ZAQ7 101 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 VAX1Q5SQQ9 334 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 ZNF329Q86UD4 541 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 PPP1R27Q86WC6 154 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 LAX1Q8IWV1 398 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 TCTEX1D1Q8N7M0 179 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 MOB3AQ96BX8 217 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 HARBI1Q96MB7 349 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 ABHD1Q96SE0 405 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 ZNF2Q9BSG1 426 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-212ENST00000482152 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
CCDC78-212ENST00000482152 RBM38Q9H0Z9 239 aaKnown RBP12.86□□□□□ -0.35
CCDC78-212ENST00000482152 MTFP1Q9UDX5 166 aa12.86□□□□□ -0.35
CCDC78-212ENST00000482152 IGHG4P01861 327 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 UBE2KP61086 200 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 CATR1Q13166 79 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 NSUN5P1Q3KNT7 163 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 TCTEX1D4Q5JR98 221 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 RNF152Q8N8N0 203 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 OR4S2Q8NH73 311 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 MCFD2Q8NI22 146 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 CD300LFQ8TDQ1 290 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 TCTEX1D2Q8WW35 142 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 RBMXL1Q96E39 390 aaKnown RBP12.85□□□□□ -0.35
CCDC78-212ENST00000482152 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
CCDC78-212ENST00000482152 RBFOX2O43251 390 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCDC78-212ENST00000482152 SLC25A17O43808 307 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 CREBL2O60519 120 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-212ENST00000482152 FCGR3BO75015 233 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 CRYZL1O95825 349 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 IGLV2-23P01705 113 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 IFNA6P05013 189 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 CRYGBP07316 175 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 S100GP29377 79 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 FXYD4P59646 89 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 CFHR3Q02985 330 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 CXorf66Q5JRM2 361 aaPredicted RBP12.84□□□□□ -0.35
CCDC78-212ENST00000482152 CMTM1Q8IZ96 169 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 OR52I2Q8NH67 350 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 TMEM68Q96MH6 324 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 KLK11Q9UBX7 282 aa12.84□□□□□ -0.35
CCDC78-212ENST00000482152 TET2Q6N021 2002 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-212ENST00000482152 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 SRRM4A7MD48 611 aaKnown RBP12.83□□□□□ -0.36
CCDC78-212ENST00000482152 ADARB2-AS1A8MUL3 147 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 FCN1O00602 326 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 ATP6V0E1O15342 81 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 PPIFP30405 207 aaKnown RBP12.83□□□□□ -0.36
CCDC78-212ENST00000482152 GNRHRP30968 328 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 UCP3P55916 312 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 RPL30P62888 115 aaKnown RBP12.83□□□□□ -0.36
CCDC78-212ENST00000482152 AKIRIN2Q53H80 203 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 POC5Q8NA72 575 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 TMEM229BQ8NBD8 167 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 VSTM2AQ8TAG5 236 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 DGCR14Q96DF8 476 aaKnown RBP12.83□□□□□ -0.36
CCDC78-212ENST00000482152 PARP11Q9NR21 331 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 TAS2R8Q9NYW2 309 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 NUBP2Q9Y5Y2 271 aa12.83□□□□□ -0.36
CCDC78-212ENST00000482152 FABP12A6NFH5 140 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 TSPAN15O95858 294 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 HRASP01112 189 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 TNFSF8P32971 234 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 TAS2R19P59542 299 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 IL18Q14116 193 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 RNASE10Q5GAN6 216 aaKnown RBP12.82□□□□□ -0.36
CCDC78-212ENST00000482152 TMEM65Q6PI78 240 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 C10orf99Q6UWK7 81 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 MINDY2Q8NBR6 621 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 SMIM4Q8WVI0 70 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 R3HDM4Q96D70 268 aa12.82□□□□□ -0.36
CCDC78-212ENST00000482152 GPR31O00270 319 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 GSTZ1O43708 216 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-212ENST00000482152 CNIH1O95406 144 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 CA2P00918 260 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 PSMB8P28062 276 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 CD40LGP29965 261 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 S100A5P33763 92 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 CDX1P47902 265 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-212ENST00000482152 RPL23AP62750 156 aaKnown RBP12.81□□□□□ -0.36
CCDC78-212ENST00000482152 FXYD3Q14802 87 aa12.81□□□□□ -0.36
CCDC78-212ENST00000482152 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
CCDC78-212ENST00000482152 CLCC1Q96S66 551 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms