RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 PITPNC1Q9UKF7 332 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 GPR179Q6PRD1 2367 aa12.81□□□□□ -0.36
C9orf3-218ENST00000482056 TRAV20A0A0B4J274 112 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 C15orf65H3BRN8 121 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 VENTXO95231 258 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 HPRT1P00492 218 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 ERVK-16P61578 105 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 DNLZQ5SXM8 178 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 PRAMEF5Q5TYX0 476 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 CD177Q8N6Q3 437 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 OR4A16Q8NH70 328 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 SSX3Q99909 188 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 QTRT1Q9BXR0 403 aaKnown RBP12.8□□□□□ -0.36
C9orf3-218ENST00000482056 PROCRQ9UNN8 238 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 NKX2-8O15522 239 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 MPDU1O75352 247 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 TFF1P04155 84 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 SOD3P08294 240 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 MDKP21741 143 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-218ENST00000482056 GALR1P47211 349 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 SPCS3P61009 180 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 FDCSPQ8NFU4 85 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 GPR61Q9BZJ8 451 aa12.8□□□□□ -0.36
C9orf3-218ENST00000482056 A0A1B0GWJ7 208 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 C15orf62A8K5M9 175 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 PAGE4O60829 102 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 FCGR3BO75015 233 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 CD1BP29016 333 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 DUTP33316 252 aaKnown RBP12.79□□□□□ -0.36
C9orf3-218ENST00000482056 KIR2DS2P43631 304 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 FOXF2Q12947 444 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 P2RY6Q15077 328 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 AARDQ4LEZ3 155 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 SPINK9Q5DT21 86 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 IGFL2Q6UWQ7 119 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 BHLHA15Q7RTS1 189 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-218ENST00000482056 FAM169BQ8N8A8 192 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 OR2Z1Q8NG97 314 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 SNX22Q96L94 193 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 PYGO2Q9BRQ0 406 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 WDR83OSQ9Y284 106 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 NCOR1O75376 2440 aa12.79□□□□□ -0.36
C9orf3-218ENST00000482056 CACNA1DQ01668 2161 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 IGHV1-18A0A0C4DH31 117 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 AHRRA9YTQ3 701 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 PPP5D1E7EU14 171 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 MGST3O14880 152 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 RBFOX2O43251 390 aaKnown RBP eCLIP12.78□□□□□ -0.36
C9orf3-218ENST00000482056 PFN1P07737 140 aaKnown RBP12.78□□□□□ -0.36
C9orf3-218ENST00000482056 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
C9orf3-218ENST00000482056 LTC4SQ16873 150 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 C4orf17Q53FE4 359 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 RAB9BQ9NP90 201 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 OR6C3Q9NZP0 311 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 GAB2Q9UQC2 676 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 DOCK11Q5JSL3 2073 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 A0A1W2PPV4 95 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 PDE6DO43924 150 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 YPEL1O60688 119 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 HRASP01112 189 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 IFNA10P01566 189 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 GYPAP02724 150 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 HOXA4Q00056 320 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-218ENST00000482056 TMEM249Q2WGJ8 235 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 MORN2Q502X0 79 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 PDZD11Q5EBL8 140 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 OR52E5Q8NH55 327 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 RAB1CQ92928 201 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 YPEL2Q96QA6 119 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 GFOD1Q9NXC2 390 aa12.78□□□□□ -0.36
C9orf3-218ENST00000482056 SRRM5B3KS81 715 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 M0R1X1 148 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 PHOX2AO14813 284 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 OR9G9P0C7N8 305 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 FABP4P15090 132 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 SRP14P37108 136 aaKnown RBP12.77□□□□□ -0.37
C9orf3-218ENST00000482056 FAM209BQ5JX69 171 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 GFI1BQ5VTD9 330 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 KCNIP4Q6PIL6 250 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 LURAP1LQ8IV03 231 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 ZNF383Q8NA42 475 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 NECAP1Q8NC96 275 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 OR51G1Q8NGK1 321 aa12.77□□□□□ -0.37
C9orf3-218ENST00000482056 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
C9orf3-218ENST00000482056 URB1O60287 2271 aaKnown RBP12.77□□□□□ -0.37
C9orf3-218ENST00000482056 ZNF729A6NN14 1252 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-218ENST00000482056 CFHR2P36980 270 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 FAM3BP58499 235 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-218ENST00000482056 OR4X1Q8NH49 305 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 GATAD1Q8WUU5 269 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 S1PR3Q99500 378 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 DCTN5Q9BTE1 182 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 ZNF71Q9NQZ8 489 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-218ENST00000482056 KCNIP2Q9NS61 270 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 PTPRBP23467 1997 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 CACNA1GO43497 2377 aa12.76□□□□□ -0.37
C9orf3-218ENST00000482056 F6UZH7 168 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms