RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 GP9P14770 177 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 DTYMKP23919 212 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 CALRP27797 417 aaKnown RBP3.2□□□□□ -1.9
VPS13D-208ENST00000481484 SCAND1P57086 179 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 TPPP2P59282 170 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 GABARAPL2P60520 117 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 GNB1P62873 340 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 CX3CL1P78423 397 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 IRF3Q14653 427 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 RPL39P5Q59GN2 51 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 ASPHD1Q5U4P2 390 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 LIPKQ5VXJ0 399 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 UNQ5815/PRO19632Q6UWF5 114 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 CEACAM19Q7Z692 300 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 GTSCR1Q86UQ5 136 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 SLC25A42Q86VD7 318 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 PPP1R27Q86WC6 154 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 FAM223AQ8IWN6 122 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 Q8N402 240 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 OR10J5Q8NHC4 309 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 VSTM2AQ8TAG5 236 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 OSR1Q8TAX0 266 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-208ENST00000481484 MUC7Q8TAX7 377 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 SETD6Q8TBK2 473 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 FCGR1BQ92637 280 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 FAM3DQ96BQ1 224 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 ISOC1Q96CN7 298 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 ORAI1Q96D31 301 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 RAB3CQ96E17 227 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 USMG5Q96IX5 58 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 RCHY1Q96PM5 261 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 DUX3Q96PT4 197 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 OR4C12Q96R67 309 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 GINS4Q9BRT9 223 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 NICN1Q9BSH3 213 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 CCDC90BQ9GZT6 254 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 OR2D2Q9H210 308 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 FBXL15Q9H469 300 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 DUSP21Q9H596 190 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 GNB4Q9HAV0 340 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 RANGRFQ9HD47 186 aaPredicted RBP3.2□□□□□ -1.9
VPS13D-208ENST00000481484 Q9N2K0 584 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 SLC35D1Q9NTN3 355 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 NDUFB11Q9NX14 153 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 RDH8Q9NYR8 311 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 SIGLEC8Q9NYZ4 499 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 PEMTQ9UBM1 199 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 METTL1Q9UBP6 276 aaKnown RBP3.2□□□□□ -1.9
VPS13D-208ENST00000481484 AK3Q9UIJ7 227 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 SCOCQ9UIL1 159 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 RAB22AQ9UL26 194 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 GAB2Q9UQC2 676 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 V9GY05 133 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 ALMS1Q8TCU4 4167 aa3.2□□□□□ -1.9
VPS13D-208ENST00000481484 IGHV4OR15-8A0A075B7B6 117 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 A0A087WW49 117 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 TRBV6-7A0A0A0MS04 114 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 A0A0A6YYD4 124 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 A0A1W2PPK0 400 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 LINC01548A6NM66 108 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 M0R1X1 148 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 MFNGO00587 321 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 LDLRAD4O15165 306 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 DENRO43583 198 aaKnown RBP3.19□□□□□ -1.9
VPS13D-208ENST00000481484 SLC25A17O43808 307 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 ACTL6BO94805 426 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 CNIH1O95406 144 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 DHFRP00374 187 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 IGLV1-51P01701 117 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 IGKV1-16P04430 117 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 CTXN2P0C2S0 81 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 HSMCR30P0CW71 290 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 HIST1H1DP16402 221 aaKnown RBP3.19□□□□□ -1.9
VPS13D-208ENST00000481484 CRHBPP24387 322 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 CNTFRP26992 372 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 CEACAM6P40199 344 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 KIR2DS2P43631 304 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 VEGFCP49767 419 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 AQP4P55087 323 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 ARPC4P59998 168 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 UBE2KP61086 200 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 KIAA0141Q14154 515 aaPredicted RBP3.19□□□□□ -1.9
VPS13D-208ENST00000481484 FXYD3Q14802 87 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 PSG5Q15238 335 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 MSMO1Q15800 293 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 TATDN3Q17R31 274 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 TMEM177Q53S58 311 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 THOC7Q6I9Y2 204 aaKnown RBP3.19□□□□□ -1.9
VPS13D-208ENST00000481484 LAIR2Q6ISS4 152 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 OVCH2Q7RTZ1 564 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 ANKRD13BQ86YJ7 626 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 MMD2Q8IY49 270 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 TEX45Q8NA69 505 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 LFNGQ8NES3 379 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 OR4S2Q8NH73 311 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 GRPEL2Q8TAA5 225 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 IL17DQ8TAD2 202 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 DCUN1D4Q92564 292 aa3.19□□□□□ -1.9
VPS13D-208ENST00000481484 BORCS5Q969J3 196 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms