RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GNB4Q9HAV0 340 aa8.89□□□□□ -0.99
CCM2-213ENST00000480658 DAPK2Q9UIK4 370 aa8.89□□□□□ -0.99
CCM2-213ENST00000480658 OR2W1Q9Y3N9 320 aa8.89□□□□□ -0.99
CCM2-213ENST00000480658 SAP30O75446 220 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 TRGV3P03979 118 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 DUTP33316 252 aaKnown RBP8.88□□□□□ -0.99
CCM2-213ENST00000480658 KIR2DS2P43631 304 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 CBX5P45973 191 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 KIAA0141Q14154 515 aaPredicted RBP8.88□□□□□ -0.99
CCM2-213ENST00000480658 KCTD9Q7L273 389 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 OVCH2Q7RTZ1 564 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 SLC25A42Q86VD7 318 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 GRPEL2Q8TAA5 225 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 PHB2Q99623 299 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 SPIN2AQ99865 258 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 SPIN2BQ9BPZ2 258 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 DIABLOQ9NR28 239 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 ZNF355PQ9NSJ1 428 aa8.88□□□□□ -0.99
CCM2-213ENST00000480658 RRP15Q9Y3B9 282 aaKnown RBP8.88□□□□□ -0.99
CCM2-213ENST00000480658 SHISA3A0PJX4 238 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 MPPED1O15442 326 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 DHFRP00374 187 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 GNB1P62873 340 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 C5orf24Q7Z6I8 188 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 MMD2Q8IY49 270 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 OR4S2Q8NH73 311 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 LGALS14Q8TCE9 139 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 WWC2-AS2Q96NR7 200 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 CLCC1Q96S66 551 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 ST6GALNAC5Q9BVH7 336 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 RHBDL2Q9NX52 303 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 ZNF230Q9UIE0 474 aaPredicted RBP8.87□□□□□ -0.99
CCM2-213ENST00000480658 SCOCQ9UIL1 159 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 ANXA10Q9UJ72 324 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 FBXO7Q9Y3I1 522 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 SMAD5-AS1Q9Y6J3 95 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 NOTCH3Q9UM47 2321 aa8.87□□□□□ -0.99
CCM2-213ENST00000480658 A0A0B4J203 849 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 FAM223BA6NKX1 122 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 FCN1O00602 326 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 SOX15O60248 233 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 PROP1O75360 226 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 LY86O95711 162 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 CRYZL1O95825 349 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 IGLV2-23P01705 113 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 HLA-DQB1P01920 261 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 EGR2P11161 476 aaPredicted RBP8.86□□□□□ -0.99
CCM2-213ENST00000480658 MAS1LP35410 378 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 CDK10Q15131 360 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 ACSM6Q6P461 480 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 ZNF66Q6ZN08 573 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 FAM223AQ8IWN6 122 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 BVESQ8NE79 360 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 DDB2Q92466 427 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 DCUN1D4Q92564 292 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 RHOVQ96L33 236 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 OR5B12Q96R08 314 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 DCUN1D5Q9BTE7 237 aa8.86□□□□□ -0.99
CCM2-213ENST00000480658 FAM103A1Q9BTL3 118 aaKnown RBP8.86□□□□□ -0.99
CCM2-213ENST00000480658 TMEM235A6NFC5 223 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 TUSC2O75896 110 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 TNFAIP8O95379 198 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 HRASP01112 189 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 CRYGBP07316 175 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 FGF2P09038 288 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 SDC2P34741 201 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 CATR1Q13166 79 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 PRSS8Q16651 343 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 NR2C2APQ86WQ0 139 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 CD300LFQ8TDQ1 290 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 CYYR1Q96J86 154 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 TINAGL1Q9GZM7 467 aaPredicted RBP8.85□□□□□ -0.99
CCM2-213ENST00000480658 COA4Q9NYJ1 87 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 PEMTQ9UBM1 199 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 SPATA2Q9UM82 520 aa8.85□□□□□ -0.99
CCM2-213ENST00000480658 RBMX2Q9Y388 322 aaKnown RBP8.85□□□□□ -0.99
CCM2-213ENST00000480658 LSM4Q9Y4Z0 139 aaKnown RBP8.85□□□□□ -0.99
CCM2-213ENST00000480658 IGHV4OR15-8A0A075B7B6 117 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 A0A087WW49 117 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 LOC100506127A0A0U1RQW1 187 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 H0Y980 276 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 CYB5BO43169 146 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 AIREO43918 545 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 OR9G9P0C7N8 305 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 PLA2G7Q13093 441 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 TNXAQ16473 311 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 IDNKQ5T6J7 187 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 ASPHD1Q5U4P2 390 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 ANKRD13BQ86YJ7 626 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 BEST4Q8NFU0 473 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 OR4A5Q8NH83 315 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 DNAH3Q8TD57 4116 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 NUDCD2Q8WVJ2 157 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 SRSF12Q8WXF0 261 aaKnown RBP8.84□□□□□ -0.99
CCM2-213ENST00000480658 ACOT12Q8WYK0 555 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 MAFIPQ8WZ33 124 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 SNAPC3Q92966 411 aa8.84□□□□□ -0.99
CCM2-213ENST00000480658 DLX4Q92988 240 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms