RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 TCF21O43680 179 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 CLN5O75503 358 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 GAPDHP04406 335 aaKnown RBP6.7□□□□□ -1.34
USP54-212ENST00000480210 TBPP20226 339 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 SAA4P35542 130 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 GDNFP39905 211 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 ZNF137PP52743 207 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 SPCS3P61009 180 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 RPL15P61313 204 aaKnown RBP6.7□□□□□ -1.34
USP54-212ENST00000480210 ZNF816Q0VGE8 651 aaPredicted RBP6.7□□□□□ -1.34
USP54-212ENST00000480210 KLRD1Q13241 179 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 PEA15Q15121 130 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 LTC4SQ16873 150 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 BRD3OSQ6XYD6 125 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 LIAT1Q6ZQX7 453 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 IL17RELQ6ZVW7 336 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 THNSL2Q86YJ6 484 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 IZUMO1Q8IYV9 350 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.7□□□□□ -1.34
USP54-212ENST00000480210 ZNF439Q8NDP4 499 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 OR4P4Q8NGL7 312 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 SMIM4Q8WVI0 70 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 SSMEM1Q8WWF3 244 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 RPEQ96AT9 228 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 S1PR3Q99500 378 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 ABHD14AQ9BUJ0 271 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 ARL6Q9H0F7 186 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 NIT2Q9NQR4 276 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 MGAT4CQ9UBM8 478 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 MTFP1Q9UDX5 166 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 ZNF230Q9UIE0 474 aaPredicted RBP6.7□□□□□ -1.34
USP54-212ENST00000480210 PITPNC1Q9UKF7 332 aa6.7□□□□□ -1.34
USP54-212ENST00000480210 NSD1Q96L73 2696 aaPredicted RBP6.69□□□□□ -1.34
USP54-212ENST00000480210 IGHV3-43A0A0B4J1X8 118 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 MEX3AA1L020 520 aaKnown RBP6.69□□□□□ -1.34
USP54-212ENST00000480210 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 LINC00587B1AMM8 73 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 LY6LH3BQJ8 138 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 SMLR1H3BR10 107 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 TGOLN2O43493 480 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 LANCL1O43813 399 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 IGHV3-43DP0DP04 118 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 RIPPLY3P57055 190 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 TAS2R19P59542 299 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 HILS1P60008 231 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 MSMO1Q15800 293 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 SSX2Q16385 188 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 LRRC75BQ2VPJ9 315 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 CT45A1Q5HYN5 189 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 TPTE2P1Q5T6R2 138 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 RUSC1-AS1Q66K80 236 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 DHRS11Q6UWP2 260 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 Q6ZPA2 131 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 SSX9Q7RTT3 188 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 TMEM229BQ8NBD8 167 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 ZBTB34Q8NCN2 500 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 OR52L2PQ8NGH6 319 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 OR5H2Q8NGV7 314 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 CT45A3Q8NHU0 189 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 ABHD1Q96SE0 405 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 RAB18Q9NP72 206 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 COMMD9Q9P000 198 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 ZNRD1Q9P1U0 126 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 RBM7Q9Y580 266 aaKnown RBP6.69□□□□□ -1.34
USP54-212ENST00000480210 MTORP42345 2549 aa6.69□□□□□ -1.34
USP54-212ENST00000480210 IGHV3OR16-10A0A075B7F0 116 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 IGKV1-6A0A0C4DH72 117 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 A0A0U1RQK1 487 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 TSTD3H0UI37 97 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.34
USP54-212ENST00000480210 CFDP00746 253 aaPredicted RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 CSF1P09603 554 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 OR5H8P0DN80 308 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 SLC25A4P12235 298 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 CXCL3P19876 107 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 BTCP35070 178 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 PPP1CCP36873 323 aaKnown RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 IER3P46695 156 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 GNG10P50151 68 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 LUMP51884 338 aaPredicted RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 ZNF134P52741 427 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 TAS2R60P59551 318 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 HERPUD1Q15011 391 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 C16orf82Q7Z2V1 217 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 H1FOOQ8IZA3 346 aaPredicted RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 BCL6BQ8N143 479 aaPredicted RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 LYG1Q8N1E2 194 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 COMMD1Q8N668 190 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 GVQW1Q8N7I0 195 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 OR10V1Q8NGI7 309 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 ST8SIA2Q92186 375 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 GCDHQ92947 438 aaPredicted RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 TOMM40LQ969M1 308 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 RAB24Q969Q5 203 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 ST6GALNAC6Q969X2 333 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 SAT2Q96F10 170 aaPredicted RBP6.68□□□□□ -1.34
USP54-212ENST00000480210 AJUBAQ96IF1 538 aa6.68□□□□□ -1.34
USP54-212ENST00000480210 SLC6A7Q99884 636 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms