RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 AKIRIN2Q53H80 203 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 UBE2NLQ5JXB2 153 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 GPR107Q5VW38 600 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 PYHIN1Q6K0P9 492 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 BAIAP2L2Q6UXY1 529 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF562Q6V9R5 426 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 HOGA1Q86XE5 327 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 H1FOOQ8IZA3 346 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 DRAM1Q8N682 238 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 KLHDC1Q8N7A1 406 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 Q8N9W7 124 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 MINDY2Q8NBR6 621 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 OR4X2Q8NGF9 303 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 OR10J5Q8NHC4 309 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 RAB2BQ8WUD1 216 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 GIMAP1Q8WWP7 306 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 SLC25A38Q96DW6 304 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 S100A16Q96FQ6 103 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 ABHD14BQ96IU4 210 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TSNAXQ99598 290 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 MRPS26Q9BYN8 205 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 GPR61Q9BZJ8 451 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 OR51E2Q9H255 320 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 ZMAT5Q9UDW3 170 aaKnown RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 DAPK2Q9UIK4 370 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 ANXA10Q9UJ72 324 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 WASHC3Q9Y3C0 194 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 OR2W1Q9Y3N9 320 aa3.86□□□□□ -1.79
PTCD3-213ENST00000480102 TSSC4Q9Y5U2 329 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-213ENST00000480102 A0A075B6Q4 140 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SLC31A2O15432 143 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 NBR2O15453 112 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 HSPA12AO43301 675 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 B3GALNT1O75752 331 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 NUDT3O95989 172 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SMIM18P0DKX4 95 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 BTF3P20290 206 aaKnown RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 PSMB8P28062 276 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SOX6P35712 828 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 PPP1CCP36873 323 aaKnown RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 TALDO1P37837 337 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 RPL5P46777 297 aaKnown RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 CDX1P47902 265 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 THBS3P49746 956 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 RORCP51449 518 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 CLDN12P56749 244 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ACTBP60709 375 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 PRB3Q04118 309 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 TMEM267Q0VDI3 215 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 NEDD8Q15843 81 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 LY6EQ16553 131 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 POU2AF1Q16633 256 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 C5orf64Q2M2E5 130 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 MOGAT2Q3SYC2 334 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ABCA11PQ4W5N1 156 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 UTF1Q5T230 341 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 HES5Q5TA89 166 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 TEX38Q6PEX7 206 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 DHRS11Q6UWP2 260 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF66Q6ZN08 573 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SLC35E3Q7Z769 313 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 LYG1Q8N1E2 194 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 STPG2Q8N412 459 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF645Q8N7E2 425 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 OR5M8Q8NGP6 311 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 OSR1Q8TAX0 266 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 LGALS14Q8TCE9 139 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 CD300LFQ8TDQ1 290 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 CCDC107Q8WV48 283 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 DDB2Q92466 427 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ATP6V0BQ99437 205 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 HSD17B10Q99714 261 aaKnown RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SRSF8Q9BRL6 282 aaKnown RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 MCRIP2Q9BUT9 160 aaKnown RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 FUNDC2Q9BWH2 189 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ATG5Q9H1Y0 275 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SLA2Q9H6Q3 261 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 AUNIPQ9H7T9 357 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 CHMP1AQ9HD42 196 aaPredicted RBP3.85□□□□□ -1.79
PTCD3-213ENST00000480102 RDH8Q9NYR8 311 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF221Q9UK13 617 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 RNF150Q9ULK6 438 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 A3GALT2U3KPV4 340 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 PKD1L1Q8TDX9 2849 aa3.85□□□□□ -1.79
PTCD3-213ENST00000480102 SMIM31A0A1B0GVY4 71 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 RRHO14718 337 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 CTDSPLO15194 276 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 SSX5O60225 188 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 APOA2P02652 100 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 CRYGBP07316 175 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 CSF1P09603 554 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 SCTP09683 121 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 GNB3P16520 340 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 ZNF182P17025 639 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 DUTP33316 252 aaKnown RBP3.84□□□□□ -1.79
PTCD3-213ENST00000480102 KIR2DS2P43631 304 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 GNG10P50151 68 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 TAS2R46P59540 309 aa3.84□□□□□ -1.79
PTCD3-213ENST00000480102 GNG2P59768 71 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms