RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CRYZL1O95825 349 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 IGLV2-14P01704 120 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 TBPP20226 339 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 SSBP1Q04837 148 aaKnown RBP16.16■□□□□ 0.18
VARS-224ENST00000479051 CATR1Q13166 79 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 ZNF660Q6AZW8 331 aaPredicted RBP16.16■□□□□ 0.18
VARS-224ENST00000479051 OSR1Q8TAX0 266 aaPredicted RBP16.16■□□□□ 0.18
VARS-224ENST00000479051 MOB3AQ96BX8 217 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 CITED2Q99967 270 aaPredicted RBP16.16■□□□□ 0.18
VARS-224ENST00000479051 MMP27Q9H306 513 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 OR51J1Q9H342 316 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 ZNF580Q9UK33 172 aa16.16■□□□□ 0.18
VARS-224ENST00000479051 SLC25A17O43808 307 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 IFNA6P05013 189 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 IGF1P05019 195 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 S100A5P33763 92 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 KIR2DS2P43631 304 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 CD83Q01151 205 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 NSUN5P1Q3KNT7 163 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 VMA21Q3ZAQ7 101 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 RNASE10Q5GAN6 216 aaKnown RBP16.15■□□□□ 0.18
VARS-224ENST00000479051 ZNF329Q86UD4 541 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 MFSD4AQ8N468 514 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 OR4S2Q8NH73 311 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 PARP11Q9NR21 331 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 KLK11Q9UBX7 282 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 A3GALT2U3KPV4 340 aa16.15■□□□□ 0.18
VARS-224ENST00000479051 IGHV7-81A0A0B4J1V7 117 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 FABP12A6NFH5 140 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 KHDC1LQ5JSQ8 128 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 VAX1Q5SQQ9 334 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 TEX38Q6PEX7 206 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 ABHD5Q8WTS1 349 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 CLCC1Q96S66 551 aa16.14■□□□□ 0.17
VARS-224ENST00000479051 TSSC4Q9Y5U2 329 aaPredicted RBP16.14■□□□□ 0.17
VARS-224ENST00000479051 CTDSPLO15194 276 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 TNFSF12O43508 249 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 S100GP29377 79 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 TNFSF8P32971 234 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 TAS2R19P59542 299 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 RPL30P62888 115 aaKnown RBP16.13■□□□□ 0.17
VARS-224ENST00000479051 DGCR2P98153 550 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 EIF4EBP1Q13541 118 aaPredicted RBP16.13■□□□□ 0.17
VARS-224ENST00000479051 OR2B11Q5JQS5 317 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 LPCAT3Q6P1A2 487 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 TREML4Q6UXN2 200 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 PPP1R27Q86WC6 154 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 CMTM1Q8IZ96 169 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 TMEM229BQ8NBD8 167 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 SMIM4Q8WVI0 70 aa16.13■□□□□ 0.17
VARS-224ENST00000479051 DGCR14Q96DF8 476 aaKnown RBP16.13■□□□□ 0.17
VARS-224ENST00000479051 ATP6V0E1O15342 81 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 CREBL2O60519 120 aaPredicted RBP16.12■□□□□ 0.17
VARS-224ENST00000479051 IGLV2-23P01705 113 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 UBE2KP61086 200 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 CX3CL1P78423 397 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 C10orf99Q6UWK7 81 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 ZNF562Q6V9R5 426 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 ZNF818PQ6ZRF7 136 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 POC5Q8NA72 575 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 OR4F17Q8NGA8 305 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 OR4F4Q96R69 305 aa16.12■□□□□ 0.17
VARS-224ENST00000479051 M0QYG6 137 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 FCN1O00602 326 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 CA2P00918 260 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 CD3DP04234 171 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 GNRHRP30968 328 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 TMEM267Q0VDI3 215 aaPredicted RBP16.11■□□□□ 0.17
VARS-224ENST00000479051 TCTEX1D4Q5JR98 221 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 CXorf66Q5JRM2 361 aaPredicted RBP16.11■□□□□ 0.17
VARS-224ENST00000479051 AADACL3Q5VUY0 350 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 HIST2H2BDQ6DRA6 164 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 ARRDC1Q8N5I2 433 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 TEX45Q8NA69 505 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 AIFM2Q9BRQ8 373 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 FXYD6Q9H0Q3 95 aa16.11■□□□□ 0.17
VARS-224ENST00000479051 TRAV41A0A0B4J266 112 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 A0A1W2PRX2 142 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 GPR31O00270 319 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 CNIH1O95406 144 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 TSPAN15O95858 294 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 ELANEP08246 267 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 FOXE3Q13461 319 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 SPAG16Q8N0X2 631 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 TCTEX1D1Q8N7M0 179 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 VSTM2AQ8TAG5 236 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 FAM110DQ8TAY7 271 aaPredicted RBP16.1■□□□□ 0.17
VARS-224ENST00000479051 CD300LFQ8TDQ1 290 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 ARPC1AQ92747 370 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 TPSG1Q9NRR2 321 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 ZFP57Q9NU63 452 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 WSB1Q9Y6I7 421 aa16.1■□□□□ 0.17
VARS-224ENST00000479051 SRRM4A7MD48 611 aaKnown RBP16.09■□□□□ 0.17
VARS-224ENST00000479051 RBFOX2O43251 390 aaKnown RBP eCLIP16.09■□□□□ 0.17
VARS-224ENST00000479051 GSTZ1O43708 216 aaPredicted RBP16.09■□□□□ 0.17
VARS-224ENST00000479051 RAB3DO95716 219 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 HRASP01112 189 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 CRYGBP07316 175 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 UCP3P55916 312 aa16.09■□□□□ 0.17
VARS-224ENST00000479051 GNB1P62873 340 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms