RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 LHFPL5Q8TAF8 219 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 GPR151Q8TDV0 419 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 C15orf40Q8WUR7 153 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 GEMIN6Q8WXD5 167 aaKnown RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 TESCQ96BS2 214 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 C10orf35Q96D05 121 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 IMP4Q96G21 291 aaKnown RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 MRPL48Q96GC5 212 aaKnown RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 PSKH2Q96QS6 385 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 C7orf50Q9BRJ6 194 aaKnown RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 PDCD10Q9BUL8 212 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF436Q9C0F3 470 aaPredicted RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 OR8D2Q9GZM6 311 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 SPNS1Q9H2V7 528 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 ISYNA1Q9NPH2 558 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 SDHAF3Q9NRP4 125 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NLE1Q9NVX2 485 aaPredicted RBP3.04□□□□□ -1.92
CCDC171-207ENST00000478913 MCUBQ9NWR8 336 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 MS4A12Q9NXJ0 267 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 PSG11Q9UQ72 335 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 ANGPT4Q9Y264 503 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 CBY1Q9Y3M2 126 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 NUBP2Q9Y5Y2 271 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 HEATR5BQ9P2D3 2071 aa3.04□□□□□ -1.92
CCDC171-207ENST00000478913 A0A096LNJ9 63 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 KIR2DL5BA0A0G2JN68 375 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 KIR2DL5BA0A0G2JPC4 375 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 GLYATL1P3A0A0U1RQE8 302 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 LOC285095A0A1B0GVY8 99 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 A0A1W2PQL4 384 aaPredicted RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 XKRY2A2RUG3 117 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 ARRDC5A6NEK1 342 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 PCP4L1A6NKN8 68 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 LEUTXA8MZ59 168 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 ZNF879B4DU55 563 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 HSBP1L1C9JCN9 74 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 C9JVG2 144 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 H3BN98 237 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 H7C2Y5 167 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 MANBAO00462 879 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 SLC31A2O15432 143 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 ENTPD6O75354 484 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 STK16O75716 305 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CRTAPO75718 401 aaPredicted RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CDRT1O95170 752 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 GADD45GO95257 159 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CPSF4O95639 269 aaKnown RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 HLA-DPB1P04440 258 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 ALDOBP05062 364 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 HLA-DQB2P05538 268 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 RAB3AP20336 220 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 GSTM3P21266 225 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 LCN1P31025 176 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 KDELR2P33947 212 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 DAPP51397 102 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CRISP3P54108 245 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 FBXW4P57775 412 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 DSTNP60981 165 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 SNRPGP62308 76 aaKnown RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 FLI1Q01543 452 aaPredicted RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 MLLT11Q13015 90 aaPredicted RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 GNA13Q14344 377 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 OR4D1Q15615 310 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 TRAM1Q15629 374 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CLLU1Q5K131 121 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CPTPQ5TA50 214 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 C1orf134Q5TEV5 83 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 RPS27LQ71UM5 84 aaKnown RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 KIR2DL5AQ8N109 375 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 UMODL1-AS1Q8N2C9 162 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 PROKR2Q8NFJ6 384 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 OR8J1Q8NGP2 316 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 KIR2DL5BQ8NHK3 375 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 ELMO1Q92556 727 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 RBPMSQ93062 196 aaKnown RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 SLC25A46Q96AG3 418 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 GPR21Q99679 349 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 GINS4Q9BRT9 223 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 SRRQ9GZT4 340 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 OR51E2Q9H255 320 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 OR51B5Q9H339 312 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 NDUFB11Q9NX14 153 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 LYARQ9NX58 379 aaKnown RBP3.03□□□□□ -1.92
CCDC171-207ENST00000478913 CALYQ9NYX4 217 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 MED11Q9P086 117 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 OR5V1Q9UGF6 321 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 SCP2D1Q9UJQ7 156 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 ALG5Q9Y673 324 aa3.03□□□□□ -1.92
CCDC171-207ENST00000478913 KMT2DO14686 5537 aa3.03□□□□□ -1.93
CCDC171-207ENST00000478913 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 CIB4A0PJX0 185 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 TRAPPC13A5PLN9 417 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 NAP1L6A6NFF2 107 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 H3BSH0 61 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 TEX46H3BTG2 121 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 FAAHO00519 579 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 GMDSO60547 372 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 PSIP1O75475 530 aaKnown RBP3.02□□□□□ -1.93
CCDC171-207ENST00000478913 SERPINA3P01011 423 aa3.02□□□□□ -1.93
CCDC171-207ENST00000478913 C8GP07360 202 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms