RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 ARPC1AQ92747 370 aa16.88■□□□□ 0.29
COL9A3-211ENST00000477612 HARBI1Q96MB7 349 aa16.88■□□□□ 0.29
COL9A3-211ENST00000477612 FAM103A1Q9BTL3 118 aaKnown RBP16.88■□□□□ 0.29
COL9A3-211ENST00000477612 ZMAT5Q9UDW3 170 aaKnown RBP16.88■□□□□ 0.29
COL9A3-211ENST00000477612 TRAV18A0A075B6X5 111 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 TUSC2O75896 110 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 IGLV2-14P01704 120 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 NFYAP23511 347 aaPredicted RBP16.87■□□□□ 0.29
COL9A3-211ENST00000477612 RPS19P39019 145 aaKnown RBP16.87■□□□□ 0.29
COL9A3-211ENST00000477612 CBX3Q13185 183 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 FXYD3Q14802 87 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 MRGPRG-AS1Q2M3A8 158 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 OR1N2Q8NGR9 330 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 DIABLOQ9NR28 239 aa16.87■□□□□ 0.29
COL9A3-211ENST00000477612 WI2-2373I1.2A0A1W2PRP0 233 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 SHOXO15266 292 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 OR8U8P0C7N1 319 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 TGFBR1P36897 503 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 RAB25P57735 213 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 GNB1P62873 340 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 ZNF616Q08AN1 781 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 C9orf66Q5T8R8 295 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 HOGA1Q86XE5 327 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 TEX45Q8NA69 505 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 OSR1Q8TAX0 266 aaPredicted RBP16.86■□□□□ 0.29
COL9A3-211ENST00000477612 ABHD5Q8WTS1 349 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 TMEM68Q96MH6 324 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 SLA2Q9H6Q3 261 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 AUNIPQ9H7T9 357 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 A3GALT2U3KPV4 340 aa16.86■□□□□ 0.29
COL9A3-211ENST00000477612 BRI3O95415 125 aa16.85■□□□□ 0.29
COL9A3-211ENST00000477612 PJVKQ0ZLH3 352 aa16.85■□□□□ 0.29
COL9A3-211ENST00000477612 BEST4Q8NFU0 473 aa16.85■□□□□ 0.29
COL9A3-211ENST00000477612 RBMX2Q9Y388 322 aaKnown RBP16.85■□□□□ 0.29
COL9A3-211ENST00000477612 IGKV1D-13A0A0B4J2D9 117 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 H3BUA1 57 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 RAMP3O60896 148 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 IGKV1-13P0DP09 117 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 UBE2KP61086 200 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 EIF4EBP1Q13541 118 aaPredicted RBP16.84■□□□□ 0.29
COL9A3-211ENST00000477612 OVCH2Q7RTZ1 564 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 RHOVQ96L33 236 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 SCOCQ9UIL1 159 aa16.84■□□□□ 0.29
COL9A3-211ENST00000477612 J3QRK9 145 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 XRCC3O43542 346 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 CRYZL1O95825 349 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 LGALS1P09382 135 aaKnown RBP16.83■□□□□ 0.28
COL9A3-211ENST00000477612 CD40LGP29965 261 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 GVQW1Q8N7I0 195 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 CASTOR1Q8WTX7 329 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 OR5B12Q96R08 314 aa16.83■□□□□ 0.28
COL9A3-211ENST00000477612 CNIH1O95406 144 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 CBX5P45973 191 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 RPL30P62888 115 aaKnown RBP16.82■□□□□ 0.28
COL9A3-211ENST00000477612 DGCR2P98153 550 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 MSMO1Q15800 293 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 VMA21Q3ZAQ7 101 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 GRPEL2Q8TAA5 225 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 S100A16Q96FQ6 103 aaKnown RBP16.82■□□□□ 0.28
COL9A3-211ENST00000477612 HSD17B10Q99714 261 aaKnown RBP16.82■□□□□ 0.28
COL9A3-211ENST00000477612 PRELID3BQ9Y3B1 194 aa16.82■□□□□ 0.28
COL9A3-211ENST00000477612 DNAH9Q9NYC9 4486 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 SEC14L6B5MCN3 397 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 INSL3P51460 131 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 LSM3P62310 102 aaKnown RBP16.81■□□□□ 0.28
COL9A3-211ENST00000477612 UBE2NLQ5JXB2 153 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 KCTD9Q7L273 389 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 POC5Q8NA72 575 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 SLC25A46Q96AG3 418 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 KCTD12Q96CX2 325 aaKnown RBP16.81■□□□□ 0.28
COL9A3-211ENST00000477612 ALX4Q9H161 411 aaPredicted RBP16.81■□□□□ 0.28
COL9A3-211ENST00000477612 SORL1Q92673 2214 aa16.81■□□□□ 0.28
COL9A3-211ENST00000477612 LINC01619G3V211 115 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 PTHLHP12272 177 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 TPPP2P59282 170 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 ARPC4P59998 168 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 PRSS8Q16651 343 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 ZNF66Q6ZN08 573 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 DCUN1D4Q92564 292 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 SNAPC3Q92966 411 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 MS4A10Q96PG2 267 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 FUNDC2Q9BWH2 189 aa16.8■□□□□ 0.28
COL9A3-211ENST00000477612 COL7A1Q02388 2944 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 FCGR3BO75015 233 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 TRGV3P03979 118 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 HSPB1P04792 205 aaKnown RBP16.79■□□□□ 0.28
COL9A3-211ENST00000477612 FCGR2CP31995 323 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 BRWD1-AS2P59051 145 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 CDK10Q15131 360 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 MFSD4AQ8N468 514 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 ZBTB34Q8NCN2 500 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 OR5AP2Q8NGF4 316 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 OR13F1Q8NGS4 319 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 GIMAP1Q8WWP7 306 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 ANAPC10Q9UM13 185 aa16.79■□□□□ 0.28
COL9A3-211ENST00000477612 MRPS7Q9Y2R9 242 aaKnown RBP16.79■□□□□ 0.28
COL9A3-211ENST00000477612 IGHV4OR15-8A0A075B7B6 117 aa16.78■□□□□ 0.28
COL9A3-211ENST00000477612 A0A087WW49 117 aa16.78■□□□□ 0.28
COL9A3-211ENST00000477612 OVOL1O14753 267 aa16.78■□□□□ 0.28
COL9A3-211ENST00000477612 AADACP22760 399 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms