RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MLXQ9UH92 298 aa8.45□□□□□ -1.06
BRCA1-213ENST00000476777 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 TMEM213A2RRL7 107 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 DYNC1I1O14576 645 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 GGCTO75223 188 aaKnown RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 SCAF4O95104 1147 aaKnown RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 SCTP09683 121 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 HLA-DRB3P79483 266 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 SMN1Q16637 294 aaKnown RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 PRSS8Q16651 343 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 C15orf32Q32M92 178 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 ANKRD55Q3KP44 614 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 TMEM177Q53S58 311 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 GPHB5Q86YW7 130 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 TMEM217Q8N7C4 229 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 NKAIN3Q8N8D7 197 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 NECAP1Q8NC96 275 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 SRSF12Q8WXF0 261 aaKnown RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 RNF183Q96D59 192 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 DERL3Q96Q80 235 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 NICN1Q9BSH3 213 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 HDHD3Q9BSH5 251 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 RIMS4Q9H426 269 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 CLEC2DQ9UHP7 191 aa8.44□□□□□ -1.06
BRCA1-213ENST00000476777 EXOSC1Q9Y3B2 195 aaKnown RBP8.44□□□□□ -1.06
BRCA1-213ENST00000476777 DNAH11Q96DT5 4516 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 IGKV1-6A0A0C4DH72 117 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 SHOXO15266 292 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 MPPED1O15442 326 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 OR2J3O76001 311 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 UBBP0CG47 229 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 APOC4P55056 127 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 TNXAQ16473 311 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 FAM209BQ5JX69 171 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 CBR4Q8N4T8 237 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 TTC9CQ8N5M4 171 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 TEX45Q8NA69 505 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 ZNF485Q8NCK3 441 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 C5orf30Q96GV9 206 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 TM2D1Q9BX74 207 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 TMEM59Q9BXS4 323 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 PLEKHJ1Q9NW61 149 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 RDH8Q9NYR8 311 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 AK3Q9UIJ7 227 aa8.43□□□□□ -1.06
BRCA1-213ENST00000476777 DYNC1H1Q14204 4646 aaKnown RBP8.43□□□□□ -1.06
BRCA1-213ENST00000476777 A0A0A6YYD4 124 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 A8MWP6 167 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 UBE2CO00762 179 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 WBP4O75554 376 aaKnown RBP8.42□□□□□ -1.06
BRCA1-213ENST00000476777 MED14OSP0DP75 135 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 UBE2KP61086 200 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 UNC119Q13432 240 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 VMA21Q3ZAQ7 101 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 IDO2Q6ZQW0 420 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 KCNK15Q9H427 330 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 Q9N2K0 584 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 SDHAF2Q9NX18 166 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 MGAT4AQ9UM21 535 aa8.42□□□□□ -1.06
BRCA1-213ENST00000476777 DIMT1Q9UNQ2 313 aaKnown RBP8.42□□□□□ -1.06
BRCA1-213ENST00000476777 TRAV25A0A0B4J276 109 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 LOC100130705A0A1B0GUX0 176 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 ZNF320A2RRD8 509 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 MYL12AP19105 171 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 MAP2K4P45985 399 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 QRFPP83859 136 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
BRCA1-213ENST00000476777 CBX3Q13185 183 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 RTL8BQ17RB0 113 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 BTNL8Q6UX41 500 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 OR1L6Q8NGR2 347 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 PYDC1Q8WXC3 89 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 ACOT12Q8WYK0 555 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 CCDC140Q96MF4 163 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 SPIN2AQ99865 258 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 SPIN2BQ9BPZ2 258 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 OR2D2Q9H210 308 aa8.41□□□□□ -1.06
BRCA1-213ENST00000476777 KIR2DL5BA0A0G2JN68 375 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 KIR2DL5BA0A0G2JPC4 375 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 PNMA8CA0A1B0GUJ8 204 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 A0A1B0GVY2 172 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 TMEM14DPA8MWL7 114 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 SOCS1O15524 211 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 IGHV3-23P01764 117 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 C8orf88P0DMB2 117 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 RRASP10301 218 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 SRMP19623 302 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 ARL3P36405 182 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 FAM106AQ4KMX7 169 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 C1orf100Q5SVJ3 147 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 C10orf55Q5SWW7 151 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 CLEC19AQ6UXS0 136 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 C19orf35Q6ZS72 473 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 KIR2DL5AQ8N109 375 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 STPG3Q8N7X2 389 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 KIR2DL5BQ8NHK3 375 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 GGHQ92820 318 aa8.4□□□□□ -1.06
BRCA1-213ENST00000476777 ZNF430Q9H8G1 570 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms