RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 OR4F4Q96R69 305 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 WNT10AQ9GZT5 417 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 CTDSP1Q9GZU7 261 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 SLC7A10Q9NS82 523 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 DEPPQ9NTK1 212 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 ST3GAL6Q9Y274 331 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 DOCK10Q96BY6 2186 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 PTPRBP23467 1997 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 ZNF816-ZNF321PA0A0X1KG74 233 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 TUSC2O75896 110 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 WNT2P09544 360 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 PCSK4Q6UW60 755 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 Q6ZRM9 215 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 OR10V1Q8NGI7 309 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 OR10G4Q8NGN3 311 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 MRPL30Q8TCC3 161 aaKnown RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 DEFB126Q9BYW3 111 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 OR2H1Q9GZK4 316 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 CACNA1DQ01668 2161 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 KBTBD11O94819 623 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 NRASP01111 189 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 SCTP09683 121 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 NBEAP1P0C6P0 100 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 FOXG1P55316 489 aaPredicted RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 MEF2BQ02080 365 aaPredicted RBP7.08□□□□□ -1.28
VAPB-205ENST00000476395 TGIF2LYQ8IUE0 185 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 GAPTQ8N292 157 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 OR2V1Q8NHB1 315 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 LHX4Q969G2 390 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 ULBP2Q9BZM5 246 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 WDR54Q9H977 334 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 TMEM9BQ9NQ34 198 aa7.08□□□□□ -1.28
VAPB-205ENST00000476395 FKBP2P26885 142 aaKnown RBP7.07□□□□□ -1.28
VAPB-205ENST00000476395 THBS3P49746 956 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 ID3Q02535 119 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 RAB31Q13636 194 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 IGFBP7Q16270 282 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 RARRES3Q9UL19 164 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 BSNQ9UPA5 3926 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 SLC22A20A6NK97 555 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 PDCD6O75340 191 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 MDH2P40926 338 aaKnown RBP7.07□□□□□ -1.28
VAPB-205ENST00000476395 TMEM183BQ1AE95 376 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 ACOT6Q3I5F7 207 aaPredicted RBP7.07□□□□□ -1.28
VAPB-205ENST00000476395 PRR31Q5SQ13 230 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 Q8N976 141 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 OR5P3Q8WZ94 311 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 C1QTNF5Q9BXJ0 243 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 PRRG4Q9BZD6 226 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 RBFOX2O43251 390 aaKnown RBP eCLIP7.07□□□□□ -1.28
VAPB-205ENST00000476395 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 TCN2P20062 427 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 DUSP3P51452 185 aaPredicted RBP7.07□□□□□ -1.28
VAPB-205ENST00000476395 RAET1LQ5VY80 246 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 TMEM211Q6ICI0 200 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 Q6ZN92 141 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 SPTSSAQ969W0 71 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 APH1AQ96BI3 265 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 DAZAP1Q96EP5 407 aaKnown RBP7.07□□□□□ -1.28
VAPB-205ENST00000476395 AGMATQ9BSE5 352 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 PGPEP1Q9NXJ5 209 aa7.07□□□□□ -1.28
VAPB-205ENST00000476395 A0A1W2PPV4 95 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 NPIPA3F8WFD2 350 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 KLRC4-KLRK1H3BQV0 150 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 SPINK4O60575 86 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 CCL4P13236 92 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 BCL3P20749 454 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 ATP5J2P56134 94 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 SPATA45Q537H7 98 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 LDLRAD2Q5SZI1 272 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 PXMP4Q9Y6I8 212 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 TECTAO75443 2155 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 TRAV1-1A0A0B4J248 108 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 UBE2L5PA0A1B0GUS4 154 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 HYPMO75409 117 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 MPLP40238 635 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 ID1P41134 155 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 GFRA1P56159 465 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 HERV-K104P61576 105 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.06□□□□□ -1.28
VAPB-205ENST00000476395 ZNF611Q8N823 705 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 OR51H1Q8NH63 302 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 FAM222BQ8WU58 562 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 CCL28Q9NRJ3 127 aa7.06□□□□□ -1.28
VAPB-205ENST00000476395 PAGE4O60829 102 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 CRYBA4P53673 196 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 ASPHD1Q5U4P2 390 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 LCN12Q6JVE5 192 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 ACSM6Q6P461 480 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 MRGPRGQ86SM5 289 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 YRDCQ86U90 279 aaKnown RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 CISD2Q8N5K1 135 aaKnown RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 PSMF1Q92530 271 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 LOXL4Q96JB6 756 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 ZNF552Q9H707 407 aaPredicted RBP7.05□□□□□ -1.28
VAPB-205ENST00000476395 LAMTOR2Q9Y2Q5 125 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 IFNA5P01569 189 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 UCP1P25874 307 aa7.05□□□□□ -1.28
VAPB-205ENST00000476395 ZXDAP98168 799 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms