RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 GVQW1Q8N7I0 195 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 C4orf3Q8WVX3 66 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 DUX3Q96PT4 197 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 B9D2Q9BPU9 175 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 TPSG1Q9NRR2 321 aa12.62□□□□□ -0.39
COL1A1-205ENST00000476387 TUSC2O75896 110 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 CRYZL1O95825 349 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 PTHLHP12272 177 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 GNB1P62873 340 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 DGCR2P98153 550 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 VMA21Q3ZAQ7 101 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 TMEM177Q53S58 311 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 ACTBL2Q562R1 376 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 PYHIN1Q6K0P9 492 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 UNQ5815/PRO19632Q6UWF5 114 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 KCTD9Q7L273 389 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 MINDY2Q8NBR6 621 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 OR5M8Q8NGP6 311 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 GRPEL2Q8TAA5 225 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 FAM103A1Q9BTL3 118 aaKnown RBP12.61□□□□□ -0.39
COL1A1-205ENST00000476387 MRPS26Q9BYN8 205 aaKnown RBP12.61□□□□□ -0.39
COL1A1-205ENST00000476387 VSIG4Q9Y279 399 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 MRPS7Q9Y2R9 242 aaKnown RBP12.61□□□□□ -0.39
COL1A1-205ENST00000476387 RBMX2Q9Y388 322 aaKnown RBP12.61□□□□□ -0.39
COL1A1-205ENST00000476387 PRELID3BQ9Y3B1 194 aa12.61□□□□□ -0.39
COL1A1-205ENST00000476387 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 MEIS3P1A6NDR6 274 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 LINC00473A8K010 186 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 RAMP3O60896 148 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 CNIH1O95406 144 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 IGLV2-23P01705 113 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 FCER2P06734 321 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 CD40LGP29965 261 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 FXYD3Q14802 87 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 DDB2Q92466 427 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 UBE2E2Q96LR5 201 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 DCUN1D5Q9BTE7 237 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 NUBP2Q9Y5Y2 271 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 TENM3Q9P273 2699 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 TNCP24821 2201 aa12.6□□□□□ -0.39
COL1A1-205ENST00000476387 FCGR3BO75015 233 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 FCGR2CP31995 323 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 RAB9AP51151 201 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 TAS2R20P59543 309 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 CD69Q07108 199 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 FHL3Q13643 280 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 AKIRIN2Q53H80 203 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 C19orf54Q5BKX5 351 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 ZNF491Q8N8L2 437 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 LFNGQ8NES3 379 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 OSR1Q8TAX0 266 aaPredicted RBP12.59□□□□□ -0.39
COL1A1-205ENST00000476387 SECTM1Q8WVN6 248 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 TCTEX1D2Q8WW35 142 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 ACOT12Q8WYK0 555 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 HSD17B10Q99714 261 aaKnown RBP12.59□□□□□ -0.39
COL1A1-205ENST00000476387 COMMD3Q9UBI1 195 aa12.59□□□□□ -0.39
COL1A1-205ENST00000476387 SMIM31A0A1B0GVY4 71 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 GABARAPO95166 117 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 EIF4EP06730 217 aaKnown RBP12.58□□□□□ -0.4
COL1A1-205ENST00000476387 EGR2P11161 476 aaPredicted RBP12.58□□□□□ -0.4
COL1A1-205ENST00000476387 AADACP22760 399 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 RORCP51449 518 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 UBE2KP61086 200 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 RUNX1Q01196 453 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 CDK10Q15131 360 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 OR2B11Q5JQS5 317 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 C9orf66Q5T8R8 295 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 OVCH2Q7RTZ1 564 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 ANKRD13BQ86YJ7 626 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 OR5AP2Q8NGF4 316 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 OR4S2Q8NH73 311 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 SNAPC3Q92966 411 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 OR5B12Q96R08 314 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 GNB4Q9HAV0 340 aa12.58□□□□□ -0.4
COL1A1-205ENST00000476387 ARPC1BO15143 372 aaKnown RBP12.57□□□□□ -0.4
COL1A1-205ENST00000476387 SOX15O60248 233 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 CREBL2O60519 120 aaPredicted RBP12.57□□□□□ -0.4
COL1A1-205ENST00000476387 PPYP01298 95 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 APOA1P02647 267 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 CRYGBP07316 175 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 PRSS3P35030 304 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 FXYD4P59646 89 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 HERV-K104P61576 105 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 PJVKQ0ZLH3 352 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 C11orf87Q6NUJ2 197 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 MZT2AQ6P582 158 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 GPR141Q7Z602 305 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 TEX45Q8NA69 505 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 OR11H1Q8NG94 326 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 CASTOR1Q8WTX7 329 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 AP3S1Q92572 193 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 CMTM3Q96MX0 182 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
COL1A1-205ENST00000476387 TAS2R8Q9NYW2 309 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms