RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 ADTRPQ96IZ2 230 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 UBE2E2Q96LR5 201 aa16.46■□□□□ 0.23
LIME1-204ENST00000476183 FOXA2Q9Y261 457 aaPredicted RBP16.46■□□□□ 0.23
LIME1-204ENST00000476183 I3L521 148 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 SHOXO15266 292 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 XRCC3O43542 346 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 FCER2P06734 321 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 HOXD3P31249 432 aaPredicted RBP16.45■□□□□ 0.22
LIME1-204ENST00000476183 RAB25P57735 213 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 VBP1P61758 197 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 RTL8BQ17RB0 113 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 MRGPRG-AS1Q2M3A8 158 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 UBE2NLQ5JXB2 153 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 UNQ5815/PRO19632Q6UWF5 114 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 LFNGQ8NES3 379 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 ARPC1AQ92747 370 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 OR5B12Q96R08 314 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 VSIG4Q9Y279 399 aa16.45■□□□□ 0.22
LIME1-204ENST00000476183 RBMX2Q9Y388 322 aaKnown RBP16.45■□□□□ 0.22
LIME1-204ENST00000476183 RRASP10301 218 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 RPL30P62888 115 aaKnown RBP16.44■□□□□ 0.22
LIME1-204ENST00000476183 TMEM267Q0VDI3 215 aaPredicted RBP16.44■□□□□ 0.22
LIME1-204ENST00000476183 FHL3Q13643 280 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 FXYD3Q14802 87 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 AKIRIN2Q53H80 203 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 TCTEX1D1Q8N7M0 179 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 SAMD12Q8N8I0 201 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 GRPEL2Q8TAA5 225 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 SNAPC3Q92966 411 aa16.44■□□□□ 0.22
LIME1-204ENST00000476183 S100A16Q96FQ6 103 aaKnown RBP16.44■□□□□ 0.22
LIME1-204ENST00000476183 MEIS3P1A6NDR6 274 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 CRYZL1O95825 349 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 ARPC4P59998 168 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 GNB1P62873 340 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 RUNX1Q01196 453 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 EGFEM1PQ0D2K5 195 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 CBX3Q13185 183 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 EIF4EBP1Q13541 118 aaPredicted RBP16.43■□□□□ 0.22
LIME1-204ENST00000476183 ACTBL2Q562R1 376 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 ASPHD1Q5U4P2 390 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 OR11H1Q8NG94 326 aa16.43■□□□□ 0.22
LIME1-204ENST00000476183 NAA50Q9GZZ1 169 aaKnown RBP16.43■□□□□ 0.22
LIME1-204ENST00000476183 AADACP22760 399 aa16.42■□□□□ 0.22
LIME1-204ENST00000476183 MRAPQ8TCY5 172 aa16.42■□□□□ 0.22
LIME1-204ENST00000476183 MCRIP2Q9BUT9 160 aaKnown RBP16.42■□□□□ 0.22
LIME1-204ENST00000476183 ALX4Q9H161 411 aaPredicted RBP16.42■□□□□ 0.22
LIME1-204ENST00000476183 FCGR3BO75015 233 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 SLC22A5O76082 557 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 FCGR2CP31995 323 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 TAS2R20P59543 309 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 UBE2KP61086 200 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 OR5M8Q8NGP6 311 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 KCTD12Q96CX2 325 aaKnown RBP16.41■□□□□ 0.22
LIME1-204ENST00000476183 MS4A10Q96PG2 267 aa16.41■□□□□ 0.22
LIME1-204ENST00000476183 CNIH1O95406 144 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 EIF4EP06730 217 aaKnown RBP16.4■□□□□ 0.22
LIME1-204ENST00000476183 CBX5P45973 191 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 BRWD1-AS2P59051 145 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 OR2B11Q5JQS5 317 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 TMEM69Q5SWH9 247 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 IDO2Q6ZQW0 420 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 KCTD9Q7L273 389 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 OVCH2Q7RTZ1 564 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 TEX45Q8NA69 505 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 OR1N2Q8NGR9 330 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 OSR1Q8TAX0 266 aaPredicted RBP16.4■□□□□ 0.22
LIME1-204ENST00000476183 GPHA2Q96T91 129 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 GPR61Q9BZJ8 451 aa16.4■□□□□ 0.22
LIME1-204ENST00000476183 WI2-2373I1.2A0A1W2PRP0 233 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 K7EIL1 84 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 CTF1Q16619 201 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 VMA21Q3ZAQ7 101 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 PYHIN1Q6K0P9 492 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 OR5T1Q8NG75 326 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 SECTM1Q8WVN6 248 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 CCL28Q9NRJ3 127 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 COMMD3Q9UBI1 195 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 ANAPC10Q9UM13 185 aa16.39■□□□□ 0.21
LIME1-204ENST00000476183 GABARAPO95166 117 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 PPYP01298 95 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 SAA1P0DJI8 122 aaPredicted RBP16.38■□□□□ 0.21
LIME1-204ENST00000476183 ZNF616Q08AN1 781 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 PRSS8Q16651 343 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 ANKRD13BQ86YJ7 626 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 MFSD4AQ8N468 514 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 OR5AP2Q8NGF4 316 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 HSD17B10Q99714 261 aaKnown RBP16.38■□□□□ 0.21
LIME1-204ENST00000476183 TAS2R8Q9NYW2 309 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 PRELID3BQ9Y3B1 194 aa16.38■□□□□ 0.21
LIME1-204ENST00000476183 IGHV3-11P01762 117 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 LGALS1P09382 135 aaKnown RBP16.37■□□□□ 0.21
LIME1-204ENST00000476183 TPPP2P59282 170 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 CDK10Q15131 360 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 POC5Q8NA72 575 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 TCTEX1D2Q8WW35 142 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 DPF1Q92782 380 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 DCUN1D5Q9BTE7 237 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 IFT46Q9NQC8 304 aa16.37■□□□□ 0.21
LIME1-204ENST00000476183 TNFSF12O43508 249 aa16.36■□□□□ 0.21
LIME1-204ENST00000476183 OR8U8P0C7N1 319 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms