RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 ZNF616Q08AN1 781 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 DCTN2Q13561 401 aaKnown RBP8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 TMEM177Q53S58 311 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 CNIH2Q6PI25 160 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 BVESQ8NE79 360 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 LFNGQ8NES3 379 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 TSPAN14Q8NG11 270 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 OR5H6Q8NGV6 325 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 C5orf30Q96GV9 206 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 DIABLOQ9NR28 239 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 TPSG1Q9NRR2 321 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 ANXA10Q9UJ72 324 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 OR2W1Q9Y3N9 320 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 NUBP2Q9Y5Y2 271 aa8.86□□□□□ -0.99
NUDCD3-206ENST00000475952 TRAV18A0A075B6X5 111 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 I3L521 148 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 K7EIL1 84 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 SOX15O60248 233 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 IGLV2-23P01705 113 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 NFYAP23511 347 aaPredicted RBP8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 TPPP2P59282 170 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 GNB1P62873 340 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 FXYD3Q14802 87 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 VMA21Q3ZAQ7 101 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 KCTD9Q7L273 389 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 OR1N2Q8NGR9 330 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 GRPEL2Q8TAA5 225 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 SLC25A38Q96DW6 304 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 OR5B12Q96R08 314 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 SLA2Q9H6Q3 261 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 SPATA2Q9UM82 520 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 MRPS7Q9Y2R9 242 aaKnown RBP8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 DNAH1Q9P2D7 4330 aa8.85□□□□□ -0.99
NUDCD3-206ENST00000475952 TENM2Q9NT68 2774 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 LINC00473A8K010 186 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 SEC14L6B5MCN3 397 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 H3BUA1 57 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 J3QRK9 145 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 SSX5O60225 188 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 CREBL2O60519 120 aaPredicted RBP8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 RAMP3O60896 148 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 CRYZL1O95825 349 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 HLA-DQB1P01920 261 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 LGALS1P09382 135 aaKnown RBP8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 EGR2P11161 476 aaPredicted RBP8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 DGCR2P98153 550 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 KIAA0141Q14154 515 aaPredicted RBP8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 UBE2NLQ5JXB2 153 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 BEST4Q8NFU0 473 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 OSR1Q8TAX0 266 aaPredicted RBP8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 CASTOR1Q8WTX7 329 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 DDB2Q92466 427 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 YIPF6Q96EC8 236 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 TMEM68Q96MH6 324 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 PRELID3BQ9Y3B1 194 aa8.84□□□□□ -0.99
NUDCD3-206ENST00000475952 WI2-2373I1.2A0A1W2PRP0 233 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 LINC01619G3V211 115 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 ARPC1BO15143 372 aaKnown RBP8.83□□□□□ -1
NUDCD3-206ENST00000475952 TUSC2O75896 110 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 CRYGBP07316 175 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 CBX5P45973 191 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 UBE2KP61086 200 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 LSM3P62310 102 aaKnown RBP8.83□□□□□ -1
NUDCD3-206ENST00000475952 OVCH2Q7RTZ1 564 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 POC5Q8NA72 575 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 S100A16Q96FQ6 103 aaKnown RBP8.83□□□□□ -1
NUDCD3-206ENST00000475952 PHB2Q99623 299 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 HSD17B10Q99714 261 aaKnown RBP8.83□□□□□ -1
NUDCD3-206ENST00000475952 DCUN1D5Q9BTE7 237 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 AUNIPQ9H7T9 357 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 ZNF355PQ9NSJ1 428 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 RBMX2Q9Y388 322 aaKnown RBP8.83□□□□□ -1
NUDCD3-206ENST00000475952 CSMD3Q7Z407 3707 aa8.83□□□□□ -1
NUDCD3-206ENST00000475952 XRCC3O43542 346 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 FCGR3BO75015 233 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 IGHV3-11P01762 117 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 TRGV3P03979 118 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 TGFBR1P36897 503 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 RPS19P39019 145 aaKnown RBP8.82□□□□□ -1
NUDCD3-206ENST00000475952 INSL3P51460 131 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 TNXAQ16473 311 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 DEFB121Q5J5C9 76 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 ASPHD1Q5U4P2 390 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 HOGA1Q86XE5 327 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 GVQW1Q8N7I0 195 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 SAMD12Q8N8I0 201 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 TEX45Q8NA69 505 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 OR4S2Q8NH73 311 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 ACOT12Q8WYK0 555 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 MS4A10Q96PG2 267 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 ALX4Q9H161 411 aaPredicted RBP8.82□□□□□ -1
NUDCD3-206ENST00000475952 IFT46Q9NQC8 304 aa8.82□□□□□ -1
NUDCD3-206ENST00000475952 IGHV4OR15-8A0A075B7B6 117 aa8.81□□□□□ -1
NUDCD3-206ENST00000475952 A0A087WW49 117 aa8.81□□□□□ -1
NUDCD3-206ENST00000475952 IGKV1D-13A0A0B4J2D9 117 aa8.81□□□□□ -1
NUDCD3-206ENST00000475952 A0A0G2JLM5 398 aa8.81□□□□□ -1
NUDCD3-206ENST00000475952 C13orf42A0A1B0GVH6 325 aa8.81□□□□□ -1
NUDCD3-206ENST00000475952 SRRM4A7MD48 611 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms